GenSpectrum
Organisms
Influenza B/Victoria
GenSpectrum
Organisms
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza B
Influenza B/Victoria
Docs
API docs
Influenza B/Victoria
|
Browse data
Select organism section
Browse data
GS_00JPT50.2
Version 2
GS_00JPT50.1
Previous version
GS_00JPT50.2
Latest version
Compare versions
Download
Download FASTA
Download metadata TSV
USA/GS_00JPT50.2/2026-08-27
E. B. Fox,
J. M. Garrigues &
N. M. Green
Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories
Submission details
Submission ID
QB076199.1.seg1/QB076200.1.seg2/QB076201.1.seg3/QB076202.1.seg4/QB076203.1.seg5/QB076204.1.seg6/QB076205.1.seg7/QB076206.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-10-01 05:01:39 UTC
Date released
2026-10-01 05:02:18 UTC
INSDC
bioprojectAccession
PRJNA967388
biosampleAccession
SAMN63636160
INSDC accession seg1
QB076199.1
INSDC accession seg2
QB076200.1
INSDC accession seg3
QB076201.1
INSDC accession seg4
QB076202.1
INSDC accession seg5
QB076203.1
INSDC accession seg6
QB076204.1
INSDC accession seg7
QB076205.1
INSDC accession seg8
QB076206.1
NCBI release date
2026-09-28
SRA run accession
SRR40884006
Clade
Clade HA
V1A.3a.2
Clade NA
B.8
Sample details
Collection country
USA
Collection subdivision level 1
California
Collection date
2026-08-27
Isolate name
B/California/LACPHL-INF02834/2026
Host
Host
Homo sapiens
INSDC seg4
lineage_seg4
vic
Alignment and QC
Length seg1
2261 (96.9%)
Total SNPs seg1
51
Length seg2
2310 (98%)
Total SNPs seg2
55
Length seg3
2181 (97.1%)
Total SNPs seg3
55
Length seg4
1724 (91.9%)
Total deleted nucs seg4
9
Total SNPs seg4
56
Length seg5
1671 (95.5%)
Total SNPs seg5
34
Length seg6
1388 (99.1%)
Total SNPs seg6
36
Length seg7
1122 (97.8%)
Total SNPs seg7
15
Length seg8
1030 (96.5%)
Total ambiguous nucs seg8
1
Total SNPs seg8
21
Nucleotide mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
seg1
C
26
T
C
113
T
G
197
A
A
200
G
C
299
T
A
359
G
G
383
A
C
434
T
T
522
C
T
542
C
C
746
A
A
827
G
C
854
T
T
895
C
A
926
G
T
938
C
A
950
G
T
962
C
Show more
seg2
G
12
A
G
39
A
A
54
G
G
81
A
T
171
C
T
174
C
T
240
C
T
300
A
T
330
C
C
342
T
A
405
G
G
441
A
G
447
A
G
486
A
G
510
A
C
513
T
A
576
G
A
594
G
Show more
seg3
T
88
C
T
111
C
C
117
T
T
339
C
G
414
A
T
423
C
G
549
A
A
618
G
A
624
G
T
654
C
A
771
G
C
773
A
C
813
T
A
828
G
G
867
A
C
897
T
G
906
A
A
935
G
Show more
seg4
C
188
T
A
216
G
C
252
A
C
270
T
C
276
A
G
297
A
G
312
T
A
318
G
A
351
G
C
375
T
C
378
T
A
427
G
A
435
G
C
441
T
T
444
C
T
456
C
G
457
A
A
462
T
Show more
seg5
T
46
C
A
55
G
A
121
G
C
178
T
A
235
G
G
244
A
T
298
C
C
313
T
G
361
A
A
373
G
C
380
T
A
454
G
C
523
T
T
532
C
C
598
T
C
608
T
A
634
G
G
715
T
Show more
seg6
C
125
A
T
134
C
G
194
A
T
212
C
A
358
G
C
370
A
C
394
T
C
399
T
A
504
G
C
519
T
C
534
T
A
660
C
T
714
A
C
849
T
A
853
G
T
879
C
T
885
G
A
912
G
Show more
seg7
C
33
T
C
46
T
A
83
G
T
113
C
T
125
A
G
316
A
A
419
G
G
482
A
G
500
T
G
521
A
G
536
A
A
566
G
C
656
T
A
919
G
A
967
G
seg8
A
118
G
T
163
C
T
166
C
G
190
A
G
313
A
T
341
C
A
352
C
T
355
C
C
358
A
C
367
T
T
391
C
C
419
T
C
604
T
A
610
T
C
632
T
G
661
A
T
775
C
C
882
T
Show more
Deletions
seg4
562-570
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
HA1
HA1:
T
37
I
HA1:
I
117
V
HA1:
A
127
T
HA1:
E
128
D
HA1:
K
136
E
HA1:
P
144
L
HA1:
N
150
K
HA1:
G
184
E
HA1:
N
197
E
HA1:
K
203
R
HA1:
P
241
Q
HA1:
R
279
K
M1
M1:
T
15
I
M1:
R
105
K
NA
NA:
P
42
Q
NA:
I
45
T
NA:
R
65
H
NA:
V
71
A
NA:
I
120
V
NA:
P
124
T
NA:
K
220
N
NA:
K
285
E
NA:
S
295
R
NA:
N
340
D
NA:
K
343
E
NA:
G
346
R
NA:
E
358
K
NA:
D
384
G
NA:
A
395
V
NA:
S
397
K
NA:
V
401
I
NEP
NEP:
L
30
S
NEP:
S
93
P
NP
NP:
I
9
M
NP:
V
453
A
NS1
NS1:
Y
104
H
NS1:
K
107
N
NS1:
L
130
F
NS1:
H
201
Y
PA
PA:
I
208
M
PA:
T
258
K
PA:
K
312
R
PA:
T
352
A
PA:
S
530
T
PA:
G
708
D
PA:
F
709
I
PA:
N
714
S
PA:
I
723
V
PB1
PB1:
M
65
I
PB1:
I
298
T
PB1:
V
474
I
PB2
PB2:
X
303
I
PB2:
I
492
T
PB2:
X
582
E
Deletions
HA1
HA1:162-164
Insertions
N/A
Load sequences