GS_00BLBWC.1

Display Name: Hong_Kong/GS_00BLBWC.1/1997-03-01
M. Chan, M. Wang, Z. Chen, D. Hui, A. Kwok, A. Yeung, K. Liu, N. Lee & P. Chan

Submission details

Submission ID
MF955471.1.seg4
Submitting group
Date submitted
2025-03-11 10:31:20 UTC
Date released
2025-03-11 10:46:43 UTC

Authors

Author affiliations
The Chinese University of Hong Kong, Department of Microbiology, Prince of Wales Hospital

Clade

Clade HA
V1A

Alignment states and QC metrics seg4

Completeness seg4
93.26%
Length seg4
1758
Total ambiguous nucs seg4
0
Total deleted nucs seg4
0
Total frame shifts seg4
0
Total inserted nucs seg4
0
Total SNPs seg4
39
Total unknown nucs seg4
0

Sample details

Collection country
Hong Kong
Collection date
1997-03-01

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession seg4
NCBI release date
2018-08-31

INSDC seg4

Lineage seg4
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions

seg4

  • seg4:A117C
  • seg4:C123G
  • seg4:A165G
  • seg4:G220A
  • seg4:G228A
  • seg4:A273G
  • seg4:A303C
  • seg4:C309T
  • seg4:G317A
  • seg4:T402C
  • seg4:C405T
  • seg4:C412A
  • seg4:C440T
  • seg4:C441T
  • seg4:T465G
  • seg4:A514G
  • seg4:T534C
  • seg4:A573C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

    Substitutions

    HA1

  • HA1:E48K
  • HA1:K75N
  • HA1:R80K
  • HA1:T121I
  • HA1:N129K
  • HA1:I146V
  • HA1:K165N
  • HA1:P172S
    • Deletions
    None
    Insertions
    None