GS_00AWEKC.1

Display Name: USA/GS_00AWEKC.1/2025-01-15
Dohrn, C.; Dunn, D.; Gauger, P. C.

Submission details

Submission ID
PV208116.1.seg4/PV208117.1.seg6
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 14:24:59 UTC
Date released
2025-03-05 16:36:35 UTC

Authors

Author affiliations
Iowa State University Veterinary Diagnostic Lab, Bioinformatics

Sample details

Collection country
USA
Collection subdivision level 1
Iowa
Collection date
2025-01-15
Isolate name
A02858299

Host

Host name scientific
Sus scrofa
Host taxon id
9823

INSDC

INSDC accession seg4
PV208116.1
INSDC accession seg6
PV208117.1
NCBI release date
2025-03-03

Alignment states and QC metrics seg4

Length seg4
1701

Alignment states and QC metrics seg6

Length seg6
1410

INSDC seg4

Subtype seg4
H1

INSDC seg6

Subtype seg6
N1

Clade

HA subtype
H1
NA subtype
N1

Nucleotide mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None