GS_00AW0E3.1

Display Name: USA/GS_00AW0E3.1/2025-01-29
Lauring, A. S.; Papalambros, L. K.

Submission details

Submission ID
PV194089.1.seg1/PV194085.1.seg2/PV194088.1.seg3/PV194086.1.seg4/PV194091.1.seg5/PV194084.1.seg6/PV194087.1.seg7/PV194090.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 14:24:59 UTC
Date released
2025-03-05 16:35:39 UTC

Authors

Author affiliations
Lauring Lab at University of Michigan, Department of Microbiology and Immunology

Sample details

Collection country
USA
Collection subdivision level 1
Michigan
Collection date
2025-01-29
Isolate name
UM-10062081536

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PV194089.1
INSDC accession seg2
PV194085.1
INSDC accession seg3
PV194088.1
INSDC accession seg4
PV194086.1
INSDC accession seg5
PV194091.1
INSDC accession seg6
PV194084.1
INSDC accession seg7
PV194087.1
INSDC accession seg8
PV194090.1
NCBI release date
2025-02-27

Alignment states and QC metrics seg1

Length seg1
2280

Alignment states and QC metrics seg2

Length seg2
2274

Alignment states and QC metrics seg3

Length seg3
2151

Alignment states and QC metrics seg4

Length seg4
1701

Alignment states and QC metrics seg5

Length seg5
1497

Alignment states and QC metrics seg6

Length seg6
1410

Alignment states and QC metrics seg7

Length seg7
982

Alignment states and QC metrics seg8

Length seg8
838

INSDC seg4

Subtype seg4
H3

INSDC seg6

Subtype seg6
N2

Clade

HA subtype
H3
NA subtype
N2

Nucleotide mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None