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GS_001E56N.1
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Display Name: GS_001E56N.1/2024-07-05
Franco,
D.; Goya,
S.; Martinez,
A.; Moreno,
B.; Valdespino,
E.; Gaitan,
M.; Gonzalez,
C.; Moreno,
A.; Capitan-Barrios,
Z.; Carrera,
J. P.; Lopez-Verges,
S.; Pascale,
J. M.; Das,
S. R.; Arbiza,
J.; Delfraro,
A.; Abrego,
L.
Submission details
Submission ID
PQ618044.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-11-26 17:57:21 UTC
Date released
2024-11-26 17:57:39 UTC
Data use terms
Data use terms
OPEN
✕
Data Use Terms History
Changed
User
Data Use Terms
2024-11-26 17:57
insdc_ingest_user
OPEN
Close
(history)
Authors
Author affiliations
Gorgas Memorial Institute of Health Studies, Department of Research in Virology and Biotechnology
Alignment states and QC metrics
Completeness
99.91%
Length
15214
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
2
Total SNPs
232
Total unknown nucs
0
Sample details
Collection country
Panama
Collection date
2024-07-05
Isolate name
hRSV/A/Panama/ICGES-371/2024
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PQ618044.1
NCBI release date
2024-11-25
NCBI update date
2024-11-25
Clade & Lineage
Lineage
A.D.3
Nucleotide mutations
Substitutions
T
59
C
T
66
A
A
67
G
C
75
A
C
90
T
C
183
T
G
192
A
A
315
G
C
360
T
T
494
C
T
508
C
A
556
G
A
565
G
G
587
T
C
588
T
A
824
T
C
983
A
C
1012
T
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Deletions
None
Insertions
ins_15115:T, ins_2299:G
Amino acid mutations
Substitutions
F
F:
T
12
I
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
T
113
I
G:
V
131
D
G:
I
134
K
G:
K
145
N
G:
N
178
G
G:
G
224
E
G:
S
243
I
G:
T
245
A
G:
H
258
Q
G:
K
262
E
G:
I
265
L
G:
H
266
L
G:
D
284
G
G:
P
298
L
L
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
L
835
M
L:
L
1438
Q
L:
N
1723
S
L:
E
1725
G
L:
K
1727
E
L:
G
1731
D
L:
I
1930
V
L:
K
2064
R
L:
T
2069
A
L:
S
2076
G
N
N:
V
352
A
NS2
NS2:
T
76
S
P
P:
L
55
P
P:
T
92
M
Deletions
None
Insertions
None
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