GenSpectrum
Organisms
Influenza B/Victoria
GenSpectrum
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Influenza A/H1N1pdm
Influenza A/H3N2
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Influenza B
Influenza B/Victoria
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Influenza B/Victoria
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GS_00JXQTA.1
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USA/GS_00JXQTA.1/2026-09-16
A. Shteyman,
N. Chapel,
E. Keller,
T. Moore &
V. Campodonico
MDH Core Sequencing Laboratory submission group, Administration Core Sequencing Laboratory
Submission details
Submission ID
QB261422.1.seg1/QB261423.1.seg2/QB261421.1.seg3/QB261416.1.seg4/QB261419.1.seg5/QB261418.1.seg6/QB261417.1.seg7/QB261420.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-10-31 05:01:39 UTC
Date released
2026-10-31 05:02:31 UTC
INSDC
bioprojectAccession
PRJNA1418747
biosampleAccession
SAMN64492230
INSDC accession seg1
QB261422.1
INSDC accession seg2
QB261423.1
INSDC accession seg3
QB261421.1
INSDC accession seg4
QB261416.1
INSDC accession seg5
QB261419.1
INSDC accession seg6
QB261418.1
INSDC accession seg7
QB261417.1
INSDC accession seg8
QB261420.1
NCBI release date
2026-10-30
SRA run accession
SRR41445552
Clade
Clade HA
V1A.3a.2
Clade NA
B.8
Sample details
Collection country
USA
Collection subdivision level 1
Maryland
Collection date
2026-09-16
Isolate name
B/Maryland/MD-MDH-F-01766/2026
Host
Host
Homo sapiens
INSDC seg4
lineage_seg4
vic
Alignment and QC
Length seg1
2259 (96.8%)
Total SNPs seg1
48
Length seg2
2313 (98.1%)
Total SNPs seg2
58
Length seg3
2181 (97.1%)
Total SNPs seg3
55
Length seg4
1749 (93.3%)
Total deleted nucs seg4
9
Total SNPs seg4
56
Length seg5
1683 (96.2%)
Total SNPs seg5
32
Length seg6
1408 (100%)
Total inserted nucs seg6
7
Total SNPs seg6
38
Length seg7
1076 (93.8%)
Total SNPs seg7
15
Length seg8
1027 (96.3%)
Total SNPs seg8
19
Nucleotide mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
seg1
C
26
T
C
113
T
G
197
A
A
200
G
A
359
G
G
383
A
C
434
T
T
522
C
A
671
G
C
746
A
A
827
G
C
854
T
T
938
C
A
950
G
T
962
C
T
968
C
T
995
C
G
1064
A
Show more
seg2
G
12
A
T
21
C
G
39
A
A
54
G
G
81
A
T
171
C
T
174
C
T
240
C
T
300
A
T
330
C
C
342
T
A
405
G
G
441
A
G
447
A
G
510
A
C
513
T
A
525
G
A
576
G
Show more
seg3
T
88
C
T
111
C
C
117
T
T
339
C
G
414
A
T
423
C
G
549
A
A
618
G
A
624
G
T
654
C
A
771
G
C
773
A
C
813
T
A
828
G
G
867
A
C
897
T
G
906
A
A
935
G
Show more
seg4
G
39
A
C
188
T
C
252
A
C
270
T
C
276
A
G
297
A
G
312
T
A
318
G
A
351
G
C
375
T
C
378
T
A
427
G
A
435
G
C
441
T
T
444
C
T
456
C
G
457
A
A
462
T
Show more
seg5
T
46
C
A
55
G
A
121
G
C
178
T
A
224
G
A
235
G
G
244
A
T
298
C
C
313
T
G
361
A
A
373
G
C
380
T
A
454
G
C
523
T
T
532
C
C
608
T
A
634
G
G
715
T
Show more
seg6
T
9
C
C
125
A
T
134
C
G
194
A
T
212
C
A
358
G
C
394
T
C
399
T
A
504
G
C
519
T
C
534
T
A
660
C
T
714
A
C
849
T
A
853
G
T
879
C
T
885
G
A
912
G
Show more
seg7
C
33
T
C
46
T
A
83
G
T
113
C
T
125
A
G
316
A
A
419
G
G
482
A
G
500
T
G
521
A
G
536
A
A
566
G
C
656
T
A
919
G
A
967
G
seg8
A
118
G
T
163
C
T
166
C
G
190
A
T
341
C
A
352
C
T
355
A
C
358
A
T
391
C
C
419
T
C
604
T
A
610
T
C
632
T
G
661
A
T
775
C
C
882
T
A
950
G
T
963
C
A
986
C
Deletions
seg4
562-570
Insertions
seg6
ins_0:ATGAACA
Amino acid substitutions
Substitutions called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
HA1
HA1:
T
37
I
HA1:
I
117
V
HA1:
A
127
T
HA1:
E
128
D
HA1:
K
136
E
HA1:
P
144
L
HA1:
N
150
K
HA1:
G
184
E
HA1:
N
197
E
HA1:
K
203
R
HA1:
P
241
Q
HA1:
R
279
K
M1
M1:
T
15
I
M1:
R
105
K
NA
NA:
P
42
Q
NA:
I
45
T
NA:
R
65
H
NA:
V
71
A
NA:
I
120
V
NA:
K
220
N
NA:
K
285
E
NA:
S
295
R
NA:
N
306
S
NA:
T
334
A
NA:
N
340
D
NA:
K
343
E
NA:
G
346
R
NA:
E
358
K
NA:
D
384
G
NA:
A
395
V
NA:
S
397
K
NA:
V
401
I
NEP
NEP:
L
30
S
NEP:
S
93
P
NP
NP:
I
9
M
NP:
T
66
A
NP:
V
453
A
NS1
NS1:
Y
104
H
NS1:
K
107
N
NS1:
S
108
R
NS1:
L
130
F
NS1:
H
201
Y
PA
PA:
I
208
M
PA:
T
258
K
PA:
K
312
R
PA:
T
352
A
PA:
S
530
T
PA:
F
709
I
PA:
N
714
G
PA:
I
723
V
PB1
PB1:
M
65
I
PB1:
V
474
I
PB2
PB2:
X
303
I
PB2:
R
338
K
PB2:
I
492
T
PB2:
X
582
E
Deletions
HA1
HA1:162-164
Insertions
N/A
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