GenSpectrum
Organisms
Influenza B/Victoria
GenSpectrum
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Dengue 2
Dengue 3
Dengue 4
Influenza A
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza B
Influenza B/Victoria
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Influenza B/Victoria
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GS_00JP41X.1
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USA/GS_00JP41X.1/2026-09-09
A. Rothstein,
G. Muir,
A. Sum,
A. Simas,
B. Girinathan,
H. Mammadova,
P. Leeson &
D. Gratalo
Perimeter
Submission details
Submission ID
QB045861.1.seg1/QB045862.1.seg2/QB045860.1.seg3/QB045856.1.seg4/QB045858.1.seg5/QB045857.1.seg7/QB045859.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-09-25 05:01:39 UTC
Date released
2026-09-25 05:02:21 UTC
INSDC
bioprojectAccession
PRJNA989177
INSDC accession seg1
QB045861.1
INSDC accession seg2
QB045862.1
INSDC accession seg3
QB045860.1
INSDC accession seg4
QB045856.1
INSDC accession seg5
QB045858.1
INSDC accession seg7
QB045857.1
INSDC accession seg8
QB045859.1
NCBI release date
2026-09-22
Clade
Clade HA
V1A.3a.2
Sample details
Collection country
USA
Collection subdivision level 1
Florida
Collection date
2026-09-09
Isolate name
B/Florida/GKISBBBJ25731/2026
Host
Host
Homo sapiens
INSDC seg4
lineage_seg4
vic
Alignment and QC
Length seg1
2332 (99.7%)
Total inserted nucs seg1
4
Total SNPs seg1
42
Length seg2
2366 (100%)
Total inserted nucs seg2
8
Total SNPs seg2
47
Length seg3
2274 (100%)
Total inserted nucs seg3
29
Total SNPs seg3
50
Length seg4
1841 (98.1%)
Total deleted nucs seg4
9
Total SNPs seg4
54
Length seg5
1802 (100%)
Total inserted nucs seg5
52
Total SNPs seg5
36
Length seg7
1154 (100%)
Total inserted nucs seg7
7
Total SNPs seg7
24
Length seg8
1049 (98.4%)
Total SNPs seg8
25
Nucleotide mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
seg1
C
113
T
A
200
G
T
219
C
G
251
A
G
383
A
T
386
C
C
434
T
T
522
C
C
528
A
C
746
A
A
764
G
C
830
T
C
854
T
G
860
A
A
941
G
A
950
G
T
962
C
T
968
C
Show more
seg2
G
12
A
A
54
G
G
81
A
T
171
C
T
240
C
T
300
A
T
330
C
C
342
T
A
405
G
G
441
A
G
447
A
C
513
T
A
576
G
T
586
C
A
594
G
A
705
G
G
768
A
A
801
G
Show more
seg3
T
111
C
C
117
T
A
210
G
T
339
C
G
414
A
T
423
C
G
549
A
A
618
G
T
654
C
A
771
G
C
813
T
G
867
A
G
888
A
C
897
T
A
935
G
G
936
A
G
961
A
A
987
G
Show more
seg4
T
159
C
C
252
A
G
267
A
C
270
T
G
297
A
G
312
T
A
318
G
C
375
T
C
378
T
A
427
G
C
441
T
T
444
C
C
453
T
G
457
A
G
460
A
A
463
G
A
484
G
C
509
T
Show more
seg5
C
3
T
T
46
C
C
172
T
C
178
T
A
224
G
C
225
T
A
228
C
A
235
G
T
298
C
C
313
T
G
361
A
A
373
G
C
380
T
G
435
A
A
454
G
C
523
T
C
608
T
A
634
G
Show more
seg7
C
33
T
C
46
T
A
83
G
T
92
C
T
125
A
A
170
G
A
377
G
A
419
G
G
482
A
G
500
T
T
515
C
G
521
A
A
524
G
G
536
A
C
542
T
A
566
G
C
656
T
G
668
A
Show more
seg8
G
26
A
A
118
G
T
163
C
A
187
G
G
190
A
T
341
C
A
352
C
T
391
C
T
400
C
T
401
C
C
419
T
A
426
G
C
481
T
C
604
T
A
610
T
C
632
T
G
652
A
G
661
A
Show more
Deletions
seg4
562-570
Insertions
seg1
ins_0:TTTA
seg2
ins_0:GTTTTC, ins_2358:AA
seg3
ins_0:TTTGATTTATCATA, ins_2241:AGAAAC, ins_2245:ATCAAAAAT
seg5
ins_0:ATTTTCTTGTAAACTCCA, ins_1750:CGTTTGGAATATGGGTGTTTATTCTCATTAAAAT
seg7
ins_0:TCTTA, ins_1147:AA
Amino acid substitutions
Substitutions called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
BM2
BM2:
I
31
M
BM2:
I
85
M
HA1
HA1:
I
117
V
HA1:
A
127
T
HA1:
E
128
K
HA1:
N
129
D
HA1:
K
136
E
HA1:
P
144
L
HA1:
N
150
K
HA1:
A
154
E
HA1:
M
156
V
HA1:
G
184
E
HA1:
A
199
T
HA1:
K
203
R
HA1:
R
279
K
M1
M1:
T
15
I
NEP
NEP:
L
30
S
NEP:
S
93
P
NEP:
V
115
I
NP
NP:
T
66
V
NP:
Q
67
P
NP:
R
136
K
NP:
Q
344
L
NP:
V
453
A
NS1
NS1:
Y
104
H
NS1:
K
107
N
NS1:
S
124
P
NS1:
L
130
F
NS1:
D
132
G
NS1:
H
201
Y
PA
PA:
K
312
R
PA:
D
321
N
PA:
T
352
A
PA:
I
428
V
PA:
Y
458
F
PA:
S
530
T
PA:
S
547
G
PA:
F
709
I
PA:
N
714
S
PA:
I
723
V
PB1
PB1:
I
462
V
PB1:
V
474
I
PB1:
I
749
V
PB2
PB2:
X
303
I
PB2:
I
492
T
PB2:
X
582
E
Deletions
HA1
HA1:162-164
Insertions
N/A
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