GS_00J20ST.1

Peru/GS_00J20ST.1/2025-01-30
W. Lizarraga, V. Hurtado, C. Padilla, I. Silva, L. Barcena, A. Nunez, V. Jimenez, V. Dominguez, H. Bailon, O. Caceres & M. Galarza

Instituto Nacional de Salud, Lima

Submission details

Submission ID
PZ655095.1
Submitting group
Date submitted
2026-07-14 06:30:12 UTC
Date released
2026-07-14 06:30:26 UTC

INSDC

bioprojectAccession
INSDC accession
NCBI release date
2026-07-13
NCBI update date
2026-07-13

Clade & Lineage

Clade
3III_B.3.2

Sample details

Collection country
Peru
Collection subdivision level 1
Loreto
Collection date
2025-01-30
Isolate name
DENV_003/LOR/PER/2025

Alignment and QC

Length
10274 (95.7%)
Total SNPs
451
Total unknown nucs
31

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • G65A
  • C203T
  • T235C
  • T250C
  • C256T
  • A265G
  • C289T
  • T295C
  • G322T
  • C334T
  • C358T
  • C383A
  • A451G
  • C469G
  • T496G
  • T556C
  • G565A
  • C676T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001475.2 reference

Substitutions

2K

  • 2K:L17M
  • 2K:T20I

C

  • C:Q97K

E

  • E:V158I
  • E:A219T
  • E:I380T
  • E:E404A

NS1

  • NS1:I71V
  • NS1:L94I
  • NS1:L178M
  • NS1:T233S
  • NS1:S290N

NS2A

  • NS2A:L23M
  • NS2A:F38L
  • NS2A:T113M
  • NS2A:V127I
  • NS2A:V150I
  • NS2A:M186L

NS2B

  • NS2B:P57A

NS3

  • NS3:F31L
  • NS3:E43D
  • NS3:T112M
  • NS3:T176M
  • NS3:D392E

NS4A

  • NS4A:D36H
  • NS4A:V100I

NS4B

  • NS4B:I115V
  • NS4B:M151I
  • NS4B:S157P
  • NS4B:F160Y

NS5

  • NS5:V72I
  • NS5:I78M
  • NS5:T188A
  • NS5:V234I
  • NS5:A372V
  • NS5:E429D
  • NS5:I553T
  • NS5:Q562L
  • NS5:L603V
  • NS5:T629S
  • NS5:L639P
  • NS5:E820D
  • NS5:V830I
  • NS5:P864S
Deletions
N/A
Insertions
N/A