GenSpectrum
Organisms
Influenza A
GenSpectrum
Organisms
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
Docs
API docs
Influenza A
|
Browse data
Select organism section
Browse data
GS_00HTKEH.1
Download
Download FASTA
Download metadata TSV
USA/GS_00HTKEH.1/2026-05-04
K. Lantz &
T. Stuber
USDA Animal Plant Health Inspection Service-National Veterinary Services Laboratories, National Veterinary Services Laboratories
Submission details
Submission ID
PZ479940.1.seg1/PZ479941.1.seg2/PZ479942.1.seg3/PZ479943.1.seg4/PZ479944.1.seg5/PZ479945.1.seg6/PZ479946.1.seg7/PZ479947.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-02 06:13:33 UTC
Date released
2026-06-02 06:14:32 UTC
INSDC
bioprojectAccession
PRJNA1102327
biosampleAccession
SAMN60347516
INSDC accession seg1
PZ479940.1
INSDC accession seg2
PZ479941.1
INSDC accession seg3
PZ479942.1
INSDC accession seg4
PZ479943.1
INSDC accession seg5
PZ479944.1
INSDC accession seg6
PZ479945.1
INSDC accession seg7
PZ479946.1
INSDC accession seg8
PZ479947.1
NCBI release date
2026-06-01
SRA run accession
SRR38788384
Sample details
Collection country
USA
Collection subdivision level 1
ID
Collection date
2026-05-04
Isolate name
A/cattle/ID/26G07175-001-original/2026
Host
Host
Bos taurus
INSDC seg4
subtype_seg4
H5
INSDC seg6
subtype_seg6
N1
Clade
HA subtype
H5
NA subtype
N1
Nucleotide mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
N/A
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
N/A
Deletions
N/A
Insertions
N/A
Load sequences