China/GS_00HT4YV.1/2025-01-01
P. Cheng & B. Wang

Kunming medical university, School of public health

Submission details

Submission ID
PZ448834.1
Date submitted
2026-05-31 04:55:07 UTC
Date released
2026-05-31 04:56:01 UTC

Clade & Lineage

Clade
2II_F.1.1

Sample details

Collection country
China
Collection subdivision level 1
Yunnan
Collection date
2025
Isolate name
KM_01_2025

Host

INSDC

INSDC accession
NCBI release date
2026-05-30
NCBI update date
2026-05-30

Alignment and QC

Length
1485 (13.8%)
Total SNPs
104

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • C945T
  • G954A
  • T981C
  • T1009C
  • A1011G
  • C1047T
  • A1077G
  • C1086G
  • G1092T
  • T1095C
  • C1101T
  • C1113T
  • T1116C
  • A1131G
  • A1148C
  • G1170A
  • C1176T
  • G1191A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001474.2 reference

Substitutions

E

  • E:M6I
  • E:Q52H
  • E:E71A
  • E:R120T
  • E:V129I
  • E:H149N
  • E:I164V
  • E:T303I
  • E:I322V
  • E:N390S
  • E:I462V
  • E:T478S
  • E:I484V
Deletions
N/A
Insertions
N/A