GS_00HQPDM.1

Mali/GS_00HQPDM.1/2024-11-16
P. Sanchez-Mora, A. Vazquez & M. P. Sanchez-Seco

National Center of Microbiology, Arbovirus and viral imported diseases

Submission details

Submission ID
PX427455.1
Submitting group
Date submitted
2026-05-06 04:42:28 UTC
Date released
2026-05-06 04:43:22 UTC

Clade & Lineage

Clade
2II_F.1.1

Sample details

Collection country
Mali
Collection date
2024-11-16
Isolate name
DP95_2024

Host

Host

INSDC

INSDC accession
NCBI release date
2026-05-05
NCBI update date
2026-05-05

Alignment and QC

Length
485 (4.47%)
Total ambiguous nucs
5
Total SNPs
22
Total unknown nucs
1

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • C2073T
  • G2085A
  • A2105G
  • T2124C
  • C2130T
  • G2157A
  • G2160A
  • C2193T
  • T2199C
  • T2223C
  • T2241C
  • A2271G
  • A2320G
  • T2322C
  • C2349T
  • C2355T
  • A2368T
  • A2386G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001474.2 reference

Substitutions

E

  • E:N390S
  • E:I462V
  • E:T478S
  • E:I484V
Deletions
N/A
Insertions
N/A