GenSpectrum
Organisms
Influenza B/Victoria
GenSpectrum
Organisms
Influenza B/Victoria
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Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
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Influenza B/Victoria
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GS_00HNUST.1
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Download FASTA
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USA/GS_00HNUST.1/2026-04-07
A. Hassan &
B. Cherrelle
New Jersey Department of Health-Influenza Surveillance, Public Health & Environmental Laboratories (PHEL), Bioinformatics Program
Submission details
Submission ID
PZ289827.1.seg1/PZ289828.1.seg2/PZ289829.1.seg3/PZ289830.1.seg4/PZ289831.1.seg5/PZ289832.1.seg6/PZ289833.1.seg7/PZ289834.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-04-23 05:18:35 UTC
Date released
2026-04-23 05:19:10 UTC
Clade
Clade HA
V1A.3a.2
Clade NA
B.7.1
Sample details
Collection country
USA
Collection subdivision level 1
New Jersey
Collection date
2026-04-07
Isolate name
B/New Jersey/V26003944/2026
Host
Host
Homo sapiens
INSDC
INSDC accession seg1
PZ289827.1
INSDC accession seg2
PZ289828.1
INSDC accession seg3
PZ289829.1
INSDC accession seg4
PZ289830.1
INSDC accession seg5
PZ289831.1
INSDC accession seg6
PZ289832.1
INSDC accession seg7
PZ289833.1
INSDC accession seg8
PZ289834.1
NCBI release date
2026-04-16
INSDC seg4
Lineage seg4
vic
Alignment and QC
Length seg1
2259 (96.8%)
Total SNPs seg1
41
Length seg2
2313 (98%)
Total ambiguous nucs seg2
1
Total SNPs seg2
46
Length seg3
2181 (97.1%)
Total SNPs seg3
52
Length seg4
1749 (93.3%)
Total deleted nucs seg4
9
Total SNPs seg4
49
Length seg5
1683 (96.2%)
Total SNPs seg5
30
Length seg6
1408 (100%)
Total inserted nucs seg6
7
Total SNPs seg6
35
Length seg7
1076 (93.7%)
Total ambiguous nucs seg7
1
Total SNPs seg7
23
Length seg8
1027 (96.3%)
Total SNPs seg8
21
Nucleotide mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
seg1
C
113
T
A
200
G
T
219
C
G
251
A
G
383
A
T
386
C
C
434
T
T
522
C
C
528
A
C
581
A
C
708
T
C
746
A
A
764
G
C
830
T
C
854
T
A
950
G
T
962
C
T
968
C
Show more
seg2
G
12
A
A
54
G
G
81
A
T
171
C
T
240
C
T
300
A
T
330
C
C
342
T
A
405
G
G
441
A
G
447
A
G
477
T
C
513
T
A
576
G
T
586
C
A
594
G
A
705
G
G
768
A
Show more
seg3
T
111
C
C
117
T
A
174
G
T
339
C
C
345
T
T
384
A
G
414
A
T
423
C
G
549
A
A
618
G
T
654
C
A
771
G
C
813
T
G
867
A
G
888
A
C
897
T
A
935
G
G
936
A
Show more
seg4
G
144
A
T
159
C
C
252
A
C
270
T
G
297
A
G
312
T
A
318
G
C
375
T
C
378
T
A
427
G
C
441
T
C
453
T
G
457
A
G
460
A
A
463
G
A
484
G
C
509
T
T
510
C
Show more
seg5
T
46
C
C
178
T
A
224
G
A
235
G
T
298
C
C
313
T
G
361
A
A
373
G
C
380
T
A
454
G
C
523
T
C
608
T
A
634
G
A
724
G
T
742
C
A
763
G
A
829
G
C
841
T
Show more
seg6
T
9
C
C
125
A
C
152
T
T
155
C
T
212
C
C
318
A
A
358
G
C
394
T
C
399
T
C
429
T
A
504
G
C
519
T
A
557
G
A
660
C
T
714
A
C
849
T
T
879
C
T
885
G
Show more
seg7
C
33
T
C
46
T
A
83
G
T
125
A
A
377
G
T
404
C
A
419
G
G
482
A
G
500
T
T
515
C
G
521
A
A
524
G
G
536
A
C
542
T
A
566
G
C
656
T
G
668
A
A
919
G
Show more
seg8
A
118
G
T
163
C
G
190
A
T
341
C
A
352
C
T
391
C
T
400
C
C
419
T
A
426
G
G
595
A
C
604
T
A
610
T
C
632
T
G
661
A
G
685
A
T
775
C
C
882
T
A
950
G
Show more
Deletions
seg4
562-570
Insertions
seg6
ins_0:ATGAACA
Amino acid mutations
Mutations called relative to the
CY115157.1
,
CY115158.1
,
CY115156.1
,
KX058884.1
,
CY115154.1
,
CY073894.1
,
CY115152.1
&
CY115155.1
references
Substitutions
BM2
BM2:
I
85
M
BM2:
I
86
V
HA1
HA1:
I
117
V
HA1:
A
127
T
HA1:
E
128
K
HA1:
N
129
D
HA1:
K
136
E
HA1:
P
144
L
HA1:
N
150
K
HA1:
A
154
E
HA1:
G
184
E
HA1:
A
199
T
HA1:
K
203
R
HA1:
R
279
K
M1
M1:
T
15
I
NA
NA:
P
42
Q
NA:
P
51
L
NA:
L
52
S
NA:
V
71
A
NA:
I
120
V
NA:
K
186
R
NA:
K
220
N
NA:
S
295
R
NA:
N
329
D
NA:
N
340
D
NA:
K
343
E
NA:
E
358
K
NA:
G
378
E
NA:
D
384
G
NA:
A
395
I
NA:
V
401
I
NEP
NEP:
L
30
S
NEP:
S
93
P
NEP:
V
115
I
NP
NP:
T
66
A
NP:
V
453
A
NS1
NS1:
Y
104
H
NS1:
K
107
N
NS1:
L
130
F
NS1:
D
132
G
NS1:
H
201
Y
PA
PA:
K
312
R
PA:
S
348
N
PA:
T
352
A
PA:
Y
458
F
PA:
S
530
T
PA:
S
547
G
PA:
F
709
I
PA:
N
714
S
PA:
I
723
V
PB1
PB1:
V
474
I
PB2
PB2:
X
303
I
PB2:
S
444
N
PB2:
I
492
T
PB2:
X
582
E
Deletions
HA1
HA1:162-164
Insertions
N/A
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