China/GS_00HNUJ9.1/2024-08-10
L. Lin & P. Jia

Guangdong Provincial Center for Disease Control and Prevention, Institute of Infectious Disease Control and Prevention

Submission details

Submission ID
PZ110964.1
Date submitted
2026-04-23 04:29:33 UTC
Date released
2026-04-23 04:30:25 UTC

Clade & Lineage

Clade
1I_K.1.1

Sample details

Collection country
China
Collection subdivision level 1
GDzh
Collection date
2024-08-10
Isolate name
D1/China/GDzh/D240409/2024

Host

INSDC

INSDC accession
NCBI release date
2026-04-20
NCBI update date
2026-04-20

Alignment and QC

Length
1485 (13.8%)
Total SNPs
125

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • G940A
  • A957G
  • T988A
  • G991T
  • G997A
  • A1006G
  • C1007T
  • G1012A
  • C1045T
  • C1055T
  • G1081A
  • A1088G
  • C1100T
  • C1114T
  • C1144T
  • T1147C
  • G1150A
  • G1177A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001477.1 reference

Substitutions

E

  • E:N8S
  • E:N52D
  • E:T88A
  • E:K128R
  • E:T155S
  • E:S171T
  • E:A180V
  • E:K203E
  • E:I293T
  • E:V324I
  • E:S339T
  • E:V380I
  • E:I436V
  • E:I461V
  • E:T473A
  • E:M484L
Deletions
N/A
Insertions
N/A