GS_00HMK6B.1

India/GS_00HMK6B.1/2025-10-18
B. K. Pati, A. Sarfraz, M. Z. Farooque & A. Kumar

All India Institute of Medical Sciences, Microbiology

Submission details

Submission ID
PZ225548.1
Submitting group
Date submitted
2026-04-06 04:26:26 UTC
Date released
2026-04-06 04:27:18 UTC

Clade & Lineage

Clade
1III_A

Sample details

Collection country
India
Collection subdivision level 1
Bihar, Vaishali
Collection date
2025-10-18
Isolate name
3

Host

Host

INSDC

INSDC accession
NCBI release date
2026-04-05
NCBI update date
2026-04-05

Alignment and QC

Length
468 (4.36%)
Total SNPs
25

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • T171G
  • T208C
  • C214T
  • T230A
  • T244C
  • T274C
  • G302A
  • G349A
  • A355G
  • A363G
  • T368C
  • G388A
  • T397C
  • T442C
  • C443T
  • C451A
  • G466A
  • G480C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

C

  • C:V26G
  • C:L46M
  • C:G70S
  • C:N90S

prM

  • prM:S15T
  • prM:T59A
Deletions
N/A
Insertions
N/A