GS_00HMK5D.1

India/GS_00HMK5D.1/2025-08-28
B. K. Pati, A. Sarfraz, M. Z. Farooque & A. Kumar

All India Institute of Medical Sciences, Microbiology

Submission details

Submission ID
PZ225547.1
Submitting group
Date submitted
2026-04-06 04:21:48 UTC
Date released
2026-04-06 04:22:42 UTC

Clade & Lineage

Clade
2II_F.1.1

Sample details

Collection country
India
Collection subdivision level 1
Bihar, Gaya
Collection date
2025-08-28
Isolate name
2

Host

Host

INSDC

INSDC accession
NCBI release date
2026-04-05
NCBI update date
2026-04-05

Alignment and QC

Length
487 (4.54%)
Total SNPs
37

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • A152C
  • G168A
  • A177G
  • G210A
  • T226C
  • A228G
  • G252A
  • A276G
  • G294A
  • G297A
  • T312C
  • A324G
  • T330C
  • T336C
  • G372T
  • T384C
  • T397A
  • C405T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

C

  • C:E19A
  • C:S101T
  • C:M104I
  • C:L108M

prM

  • prM:D29N
  • prM:K52N
Deletions
N/A
Insertions
N/A