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Browse data
GS_00H6Q47.1
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Download FASTA
Download metadata TSV
USA/GS_00H6Q47.1/2026-02-11
A. Rothstein,
G. Muir,
A. Sum,
A. Simas,
B. Lu,
B. Girinathan,
H. Mammadova,
P. Leeson,
A. Plocik &
D. Gratalo
Ginkgo Biosecurity
Submission details
Submission ID
PZ048890.1.seg4/PZ048888.1.seg5/PZ048891.1.seg6/PZ048887.1.seg7/PZ048889.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-02-25 06:22:22 UTC
Date released
2026-02-25 06:34:08 UTC
INSDC
Bioproject accession
PRJNA989177
INSDC accession seg4
PZ048890.1
INSDC accession seg5
PZ048888.1
INSDC accession seg6
PZ048891.1
INSDC accession seg7
PZ048887.1
INSDC accession seg8
PZ048889.1
NCBI release date
2026-02-24
Clade
Clade HA
K
Clade NA
None
Sample details
Collection country
USA
Collection subdivision level 1
Washington
Collection date
2026-02-11
Isolate name
A/Washington/GKISBBBH72212/2026
Host
Host
Homo sapiens
INSDC seg4
Subtype seg4
H3
INSDC seg6
Subtype seg6
N2
Alignment and QC
Length seg4
1737 (100%)
Total SNPs seg4
125
Length seg5
1541 (98.4%)
Total SNPs seg5
58
Length seg6
1442 (100%)
Total inserted nucs seg6
3
Total SNPs seg6
19
Length seg7
1004 (97.8%)
Total SNPs seg7
28
Length seg8
867 (97.4%)
Total SNPs seg8
30
Nucleotide mutations
Mutations called relative to the
NC_007373.1
,
NC_007372.1
,
NC_007371.1
,
CY163680.1
,
NC_007369.1
,
CY114383.1
,
NC_007367.1
&
NC_007370.1
references
Substitutions
seg4
seg4:
A
24
G
seg4:
T
42
A
seg4:
G
56
T
seg4:
A
71
C
seg4:
C
72
A
seg4:
T
74
A
seg4:
C
77
T
seg4:
C
89
T
seg4:
G
155
A
seg4:
A
163
G
seg4:
C
189
T
seg4:
G
199
A
seg4:
C
203
A
seg4:
C
208
T
seg4:
G
213
A
seg4:
G
214
A
seg4:
G
222
A
seg4:
A
250
G
Show more
seg5
seg5:
A
16
G
seg5:
C
29
T
seg5:
A
40
C
seg5:
G
81
A
seg5:
G
96
A
seg5:
T
180
G
seg5:
G
207
A
seg5:
G
219
A
seg5:
G
237
A
seg5:
C
249
T
seg5:
A
351
G
seg5:
G
390
A
seg5:
G
432
T
seg5:
G
436
T
seg5:
T
447
C
seg5:
A
451
C
seg5:
C
459
T
seg5:
G
492
A
Show more
seg6
seg6:
A
2
G
seg6:
G
3
T
seg6:
T
5
A
seg6:
G
6
A
seg6:
A
7
G
seg6:
C
10
G
seg6:
C
11
A
seg6:
A
13
T
seg6:
A
14
C
seg6:
T
15
C
seg6:
C
16
A
seg6:
A
19
T
seg6:
A
20
C
seg6:
G
21
A
seg6:
T
23
A
seg6:
A
25
G
seg6:
T
26
A
seg6:
A
27
T
Show more
seg7
seg7:
A
37
T
seg7:
G
127
A
seg7:
C
188
T
seg7:
G
205
A
seg7:
G
214
T
seg7:
A
241
G
seg7:
T
292
C
seg7:
T
298
C
seg7:
A
466
G
seg7:
A
481
G
seg7:
C
493
T
seg7:
A
517
G
seg7:
G
523
A
seg7:
A
637
G
seg7:
A
658
G
seg7:
G
680
A
seg7:
C
697
T
seg7:
T
703
C
Show more
seg8
seg8:
C
53
T
seg8:
G
83
A
seg8:
G
102
A
seg8:
A
104
C
seg8:
C
116
T
seg8:
C
123
A
seg8:
T
125
C
seg8:
G
192
T
seg8:
T
205
C
seg8:
T
218
C
seg8:
A
238
G
seg8:
T
271
C
seg8:
C
275
G
seg8:
G
353
A
seg8:
G
398
A
seg8:
G
416
A
seg8:
G
430
A
seg8:
A
442
G
Show more
Deletions
None
Insertions
ins_seg6:1439:ACT
Amino acid mutations
Mutations called relative to the
NC_007373.1
,
NC_007372.1
,
NC_007371.1
,
CY163680.1
,
NC_007369.1
,
CY114383.1
,
NC_007367.1
&
NC_007370.1
references
Substitutions
HA1
HA1:
K
2
N
HA1:
L
3
I
HA1:
Q
33
R
HA1:
S
45
N
HA1:
T
48
I
HA1:
G
50
K
HA1:
D
53
N
HA1:
E
62
G
HA1:
K
83
E
HA1:
K
92
R
HA1:
Y
94
N
HA1:
N
96
S
HA1:
N
121
K
HA1:
T
131
K
HA1:
T
135
K
HA1:
S
138
A
HA1:
R
142
G
HA1:
N
145
S
Show more
HA2
HA2:
I
32
R
HA2:
N
46
D
HA2:
I
77
V
HA2:
R
121
K
HA2:
K
143
R
HA2:
G
155
E
HA2:
D
160
N
HA2:
I
193
M
HA2:
V
200
I
M1
M1:
V
219
I
M2
M2:
P
25
L
M2:
S
31
N
M2:
L
54
F
M2:
N
82
S
M2:
D
88
A
NA
NA:
L
81
P
NA:
N
93
G
NA:
P
126
L
NA:
D
147
N
NA:
V
194
I
NA:
I
215
V
NA:
K
220
N
NA:
E
221
D
NA:
S
245
N
NA:
S
247
T
NA:
H
264
N
NA:
T
267
K
NA:
L
285
P
NA:
V
303
I
NA:
I
307
M
NA:
Y
310
H
NA:
S
315
R
NA:
N
329
S
Show more
NP
NP:
A
131
S
NP:
I
136
L
NP:
V
197
I
NP:
R
236
K
NP:
T
472
A
NS1
NS1:
E
26
N
NS1:
L
33
I
NS1:
A
56
S
NS1:
V
60
A
NS1:
E
71
G
NS1:
V
82
A
NS1:
M
124
I
NS1:
S
135
N
NS1:
D
139
G
NS1:
I
171
V
NS1:
L
185
F
NS1:
K
221
E
NS1:
K
229
E
SigPep
SigPep:
T
3
A
SigPep:
Y
9
N
Deletions
None
Insertions
None
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