GS_00H4W0D.1

Bangladesh/GS_00H4W0D.1/2024-10-31
M. S. Aung & N. Kobayashi

Sapporo Medical University, Hygiene

Submission details

Submission ID
PZ017584.1
Submitting group
Date submitted
2026-02-25 04:23:11 UTC
Date released
2026-02-25 04:24:05 UTC

Clade & Lineage

Clade
2II_F.1.1

Sample details

Collection country
Bangladesh
Collection date
2024-10-31
Isolate name
MMC131-2024

Host

Host

INSDC

INSDC accession
NCBI release date
2026-02-24
NCBI update date
2026-02-24

Alignment and QC

Length
1664 (15.5%)
Total SNPs
106

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • A817G
  • G843A
  • C893T
  • C921T
  • A922G
  • C945T
  • G954A
  • T981C
  • T1009C
  • A1011G
  • C1047T
  • A1077G
  • C1086G
  • G1092T
  • T1095C
  • C1101T
  • C1113T
  • T1116C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001474.2 reference

Substitutions

E

  • E:M6I
  • E:Q52H
  • E:E71A
  • E:R120T
  • E:V129I
  • E:H149N
  • E:I164V
  • E:I322V
  • E:N390S
  • E:I462V
  • E:T478S
  • E:I484V

prM

  • prM:I127V
  • prM:M135I
  • prM:A152V
  • prM:T162A
Deletions
N/A
Insertions
N/A