GS_00H4VRX.1

Bangladesh/GS_00H4VRX.1/2025-09-30
M. S. Aung & N. Kobayashi

Sapporo Medical University, Hygiene

Submission details

Submission ID
PZ017441.1
Submitting group
Date submitted
2026-02-25 04:10:43 UTC
Date released
2026-02-25 04:11:39 UTC

Clade & Lineage

Clade
3I_A.2

Sample details

Collection country
Bangladesh
Collection date
2025-09-30
Isolate name
MMC178-2024

Host

Host

INSDC

INSDC accession
NCBI release date
2026-02-24
NCBI update date
2026-02-24

Alignment and QC

Length
2154 (20.1%)
Total SNPs
183

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • A362G
  • C364T
  • A376T
  • C383A
  • A384G
  • G400A
  • A418G
  • G421A
  • G428A
  • C439T
  • T496A
  • C532T
  • T557C
  • G565A
  • C577T
  • A600T
  • T604C
  • C607T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001475.2 reference

Substitutions

C

  • C:N90D
  • C:Q97R
  • C:I108M
  • C:A112T

E

  • E:I68V
  • E:V81I
  • E:P124L
  • E:Y132H
  • E:T169V
  • E:A219T
  • E:T223I
  • E:R231K
  • E:N270T
  • E:T301S
  • E:T303A
  • E:P362L
  • E:V377I
  • E:N383K
  • E:E404A
  • E:V452I
  • E:A479V

prM

  • prM:H55L
  • prM:R87I
  • prM:T107A
  • prM:V120I
  • prM:E124A
  • prM:T125P
  • prM:W126R
  • prM:L128I
Deletions
N/A
Insertions
N/A