GS_00H4VM5.1

Bangladesh/GS_00H4VM5.1/2024-10-31
M. S. Aung & N. Kobayashi

Sapporo Medical University, Hygiene

Submission details

Submission ID
PZ017437.1
Submitting group
Date submitted
2026-02-25 04:10:43 UTC
Date released
2026-02-25 04:11:39 UTC

Clade & Lineage

Clade
3I_A.2

Sample details

Collection country
Bangladesh
Collection date
2024-10-31
Isolate name
MMC19-2024

Host

Host

INSDC

INSDC accession
NCBI release date
2026-02-24
NCBI update date
2026-02-24

Alignment and QC

Length
1479 (13.8%)
Total SNPs
127

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • T967C
  • G976T
  • G991A
  • G1012A
  • C1015T
  • G1018T
  • C1051T
  • T1060C
  • T1069C
  • G1096A
  • G1108A
  • G1123A
  • T1129C
  • A1136G
  • A1138G
  • A1153G
  • T1156C
  • G1175A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001475.2 reference

Substitutions

E

  • E:I68V
  • E:V81I
  • E:P124S
  • E:Y132H
  • E:T169V
  • E:A219T
  • E:R231K
  • E:N270T
  • E:T301S
  • E:T303A
  • E:P362L
  • E:V377I
  • E:N383K
  • E:E404A
  • E:V452I
  • E:A479V
Deletions
N/A
Insertions
N/A