GS_00H169R.1

Spain/GS_00H169R.1/2024-09-08
J. Navero-Castillejos, R. Isanta, A. Peiro-Mestres, B. Escudero-Perez & M. J. Martinez

ISGlobal-Clinical and Provincial Hospital of Barcelona, Department of Microbiology

Submission details

Submission ID
PX978051.1
Submitting group
Date submitted
2026-02-16 04:30:30 UTC
Date released
2026-02-16 04:30:44 UTC

Clade & Lineage

Clade
1V_D.2

Sample details

Collection country
Spain
Collection date
2024-09-08
Isolate name
HCBD1960

Host

Host

INSDC

INSDC accession
NCBI release date
2026-02-14
NCBI update date
2026-02-14

Alignment and QC

Length
413 (3.71%)
Total SNPs
34
Total unknown nucs
15

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • T2155A
  • A2161G
  • G2167A
  • C2173T
  • T2188C
  • G2215A
  • G2224A
  • G2257A
  • T2260C
  • G2263A
  • A2269G
  • T2273C
  • G2302A
  • C2321T
  • C2341T
  • C2356A
  • A2362G
  • T2371C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001477.1 reference

    Substitutions

    E

  • E:V491A
    • Deletions
    None
    Insertions
    None