GS_00GRSFD.1

Display Name: USA/GS_00GRSFD.1/2025-10-23
M. Kirby, R. Garten, T. Davis & V. Dugan

Submission details

Submission ID
PX839503.1.seg4
Submitting group
Date submitted
2026-01-09 05:08:52 UTC
Date released
2026-01-09 05:09:33 UTC

Authors

Author affiliations
Centers for Disease Control and Prevention, Influenza Division

INSDC

Bioproject accession
INSDC accession seg4
NCBI release date
2026-01-08

Clade

Clade HA
V1A.3a.2

Alignment states and QC metrics seg4

Completeness seg4
98.46%
Length seg4
1847
Total ambiguous nucs seg4
0
Total deleted nucs seg4
9
Total frame shifts seg4
0
Total inserted nucs seg4
0
Total SNPs seg4
51
Total unknown nucs seg4
0

Sample details

Collection country
USA
Collection subdivision level 1
Illinois
Collection date
2025-10-23
Isolate name
B/Illinois/11/2025

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC seg4

Lineage seg4
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions

seg4

  • seg4:T159C
  • seg4:C252A
  • seg4:C270T
  • seg4:G297A
  • seg4:G312T
  • seg4:A318G
  • seg4:C375T
  • seg4:C378T
  • seg4:A427G
  • seg4:C441T
  • seg4:T444C
  • seg4:C453T
  • seg4:G457A
  • seg4:G460A
  • seg4:A463G
  • seg4:A484G
  • seg4:C509T
  • seg4:T510C
    • Deletions
    seg4:562-570
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

    Substitutions

    HA1

  • HA1:I117V
  • HA1:A127T
  • HA1:E128K
  • HA1:N129D
  • HA1:K136E
  • HA1:P144L
  • HA1:N150K
  • HA1:A154E
  • HA1:G184E
  • HA1:A199T
  • HA1:K203R
  • HA1:R279K
    • Deletions
    HA1:162-164
    Insertions
    None