Sri_Lanka/GS_00GKXTV.1/2025-07-31
N. Malavige
The Allergy, Immunology and Cell Biology Unit, The Allergy, Immunology and Cell Biology Unit
Alignment and QC
Nucleotide mutations
Mutations called relative to the NC_001474.2 reference
Substitutions
- G44A
- C54T
- A122G
- G168A
- A177G
- G210A
- T226C
- A228G
- G252A
- A276G
- G294A
- G297A
- T312C
- A324G
- T330C
- T336C
- G372T
- T384C
Amino acid substitutions
Substitutions called relative to the NC_001474.2 reference
Substitutions
C
- C:K9R
- C:S101T
- C:M104I
- C:L108M
E
- E:M6I
- E:Q52H
- E:E71A
- E:R120T
- E:V129I
- E:H149N
- E:I164V
- E:I322V
- E:N390S
- E:I462V
- E:T478S
- E:I484V
NS1
- NS1:S80T
- NS1:T117A
- NS1:S128L
- NS1:Q131H
- NS1:K174R
- NS1:F178S
- NS1:N222S
- NS1:L247F
- NS1:I264T
- NS1:T265A
- NS1:K272R
- NS1:D281E
NS2A
- NS2A:V5I
- NS2A:V109A
- NS2A:I116M
- NS2A:M136I
- NS2A:I171A
NS2B
- NS2B:L21F
- NS2B:V59I
- NS2B:K60R
- NS2B:D63E
- NS2B:I106V
NS3
- NS3:M13V
- NS3:K15R
- NS3:A120T
- NS3:I140V
- NS3:A160T
- NS3:R186K
- NS3:V273I
- NS3:I333M
- NS3:V395I
- NS3:I461V
NS4A
- NS4A:D23N
- NS4A:V64I
- NS4A:R76K
- NS4A:I89V
NS4B
- NS4B:A19T
- NS4B:V48I
- NS4B:F112L
- NS4B:T244A
NS5
- NS5:I5T
- NS5:S15N
- NS5:M70L
- NS5:R98K
- NS5:I135T
- NS5:Y201H
- NS5:Y247H
- NS5:I271T
- NS5:V335I
- NS5:R430E
- NS5:K570R
- NS5:G605V
- NS5:I637A
- NS5:Q644K
- NS5:A648V
- NS5:S676N
- NS5:I687V
- NS5:K800T
- NS5:A865T
prM
- prM:D29N
- prM:K52N
- prM:T82A
- prM:M83T
- prM:V120A
- prM:I127V
- prM:M135I
- prM:A152V
- prM:T162A