GS_00GGLNP.1

Display Name: USA/GS_00GGLNP.1/2025-09-30
M. Kirby, R. Garten, T. Davis & V. Dugan

Submission details

Submission ID
PX707767.1.seg4
Submitting group
Date submitted
2025-12-21 05:10:23 UTC
Date released
2025-12-21 05:10:47 UTC

Authors

Author affiliations
Centers for Disease Control and Prevention, Influenza Division

INSDC

Bioproject accession
INSDC accession seg4
NCBI release date
2025-12-16

Clade

Clade HA
V1A.3a.2

Alignment states and QC metrics seg4

Completeness seg4
98.46%
Length seg4
1847
Total ambiguous nucs seg4
0
Total deleted nucs seg4
9
Total frame shifts seg4
0
Total inserted nucs seg4
0
Total SNPs seg4
54
Total unknown nucs seg4
0

Sample details

Collection country
USA
Collection subdivision level 1
Colorado
Collection date
2025-09-30
Isolate name
B/Colorado/57/2025

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC seg4

Lineage seg4
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions

seg4

  • seg4:T120C
  • seg4:C252A
  • seg4:C270T
  • seg4:G297A
  • seg4:G312T
  • seg4:A318G
  • seg4:A351G
  • seg4:C375T
  • seg4:C378T
  • seg4:A427G
  • seg4:A435G
  • seg4:C441T
  • seg4:T444C
  • seg4:T456C
  • seg4:G457A
  • seg4:A484G
  • seg4:C509T
  • seg4:T510C
    • Deletions
    seg4:562-570
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

    Substitutions

    HA1

  • HA1:I117V
  • HA1:A127T
  • HA1:K136E
  • HA1:P144L
  • HA1:N150K
  • HA1:G184E
  • HA1:N197E
  • HA1:A199T
  • HA1:K203R
  • HA1:R279K
    • Deletions
    HA1:162-164
    Insertions
    None