GenSpectrum
Organisms
Influenza A
GenSpectrum
Organisms
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
Docs
API docs
Influenza A
|
Browse data
GS_00GD50M.1
Download
Download FASTA
Download metadata TSV
Display Name: USA/GS_00GD50M.1/2025-10-28
A. Hassan
Submission details
Submission ID
PX652417.1.seg4/PX652420.1.seg5/PX652419.1.seg6/PX652418.1.seg7/PX652421.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-12-04 04:45:59 UTC
Date released
2025-12-04 04:46:28 UTC
Authors
Author affiliations
New Jersey Department of Health-Influenza Surveillance, Public Health & Environmental Laboratories (PHEL), Bioinformatics Program
INSDC
Bioproject accession
PRJNA1309698
Biosample accession
SAMN53530568
INSDC accession seg4
PX652417.1
INSDC accession seg5
PX652420.1
INSDC accession seg6
PX652419.1
INSDC accession seg7
PX652418.1
INSDC accession seg8
PX652421.1
NCBI release date
2025-12-03
SRA run accession
SRR36261681
Sample details
Collection country
USA
Collection subdivision level 1
New Jersey
Collection date
2025-10-28
Isolate name
A/New Jersey/V25016124/2025
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Alignment states and QC metrics seg4
Length seg4
1578
Alignment states and QC metrics seg5
Length seg5
1497
Alignment states and QC metrics seg6
Length seg6
1410
Alignment states and QC metrics seg7
Length seg7
982
Alignment states and QC metrics seg8
Length seg8
838
INSDC seg4
Subtype seg4
H1
INSDC seg6
Subtype seg6
N1
Clade
HA subtype
H1
NA subtype
N1
Nucleotide mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Load sequences