GS_00GC868.1

Display Name: Mexico/GS_00GC868.1/2025-10-08
M. Solis-Hernandez, G. Orta-Pineda, C. J. Alcazar-Ramiro, M. A. Velazquez-Vazquez, C. Garnica-Rivera, N. Carrillo-Guzman, M. K. Rocha-Martinez, I. Tiburcio-Sanchez, H. J. Pina-Trevilla, F. J. Liljehult-Fuentes, G. Ayala-Borunda, A. Garcia-Lopez & I. E. Tetla-Zapotitla

Submission details

Submission ID
PX596316.1.seg1/PX596317.1.seg2/PX596318.1.seg3/PX596319.1.seg4/PX596320.1.seg5/PX596321.1.seg6/PX596322.1.seg7/PX596323.1.seg8
Submitting group
Date submitted
2025-11-26 05:31:55 UTC
Date released
2025-11-26 05:32:29 UTC

Authors

Author affiliations
Servicio Nacional de Sanidad, Inocuidad, y Calidad Agroalimentaria (SENASICA), CPA/CENAPA

Sample details

Collection country
Mexico
Collection subdivision level 1
Ciudad de Mexico
Collection date
2025-10-08
Isolate name
A/Gallus gallus/Ciudad de Mexico/CPA-19893-25/2025

Host

Host name scientific
Gallus gallus
Host taxon id

INSDC

INSDC accession seg1
INSDC accession seg2
INSDC accession seg3
INSDC accession seg4
INSDC accession seg5
INSDC accession seg6
INSDC accession seg7
INSDC accession seg8
NCBI release date
2025-11-24

Alignment states and QC metrics seg1

Length seg1
2331

Alignment states and QC metrics seg2

Length seg2
2325

Alignment states and QC metrics seg3

Length seg3
2202

Alignment states and QC metrics seg4

Length seg4
1740

Alignment states and QC metrics seg5

Length seg5
1543

Alignment states and QC metrics seg6

Length seg6
1396

Alignment states and QC metrics seg7

Length seg7
1025

Alignment states and QC metrics seg8

Length seg8
887

INSDC seg4

Subtype seg4
H5

INSDC seg6

Subtype seg6
N2

Clade

HA subtype
H5
NA subtype
N2

Nucleotide mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None