GS_00GAFDR.1

Display Name: India/GS_00GAFDR.1/2024-07-26
S. Sundarrajan, S. Koteshwar Narasimachar, S. Jagtap, N. Chandrasekhar & S. Katta

Submission details

Submission ID
PX498972.1
Submitting group
Date submitted
2025-11-21 04:32:31 UTC
Date released
2025-11-21 04:33:18 UTC

Authors

Author affiliations
Cancyte Technologies Pvt. Ltd, Molecular-Biology

Clade & Lineage

Clade
1III_A

Alignment states and QC metrics

Completeness
3.45%
Length
370
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
19
Total unknown nucs
0

Sample details

Collection country
India
Collection subdivision level 1
Bangalore, KA
Collection date
2024-07-26
Isolate name
CANDEN24/710

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-11-20
NCBI update date
2025-11-20

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • T230A
  • T244C
  • T274C
  • G302A
  • G349A
  • A351G
  • A355G
  • A363G
  • T368C
  • G388A
  • T397C
  • C443T
  • C451A
  • G466A
  • A499G
  • T505C
  • T544C
  • T556C
  • C577T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001477.1 reference

    Substitutions

    C

  • C:L46M
  • C:G70S
  • C:K86R
  • C:N90S
    • Deletions
    None
    Insertions
    None