GS_00GAEJF.1

Display Name: India/GS_00GAEJF.1/2024-10-09
S. Sundarrajan, S. Koteshwar Narasimachar, S. Jagtap, N. Chandrasekhar & S. Katta

Submission details

Submission ID
PX498981.1
Submitting group
Date submitted
2025-11-21 04:31:24 UTC
Date released
2025-11-21 04:32:13 UTC

Authors

Author affiliations
Cancyte Technologies Pvt. Ltd, Molecular-Biology

Clade & Lineage

Clade
2II_F.1.1

Alignment states and QC metrics

Completeness
3.28%
Length
352
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
26
Total unknown nucs
0

Sample details

Collection country
India
Collection subdivision level 1
Kuppam, AP
Collection date
2024-10-09
Isolate name
CANDEN24/0334

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-11-20
NCBI update date
2025-11-20

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • G168A
  • A177G
  • G210A
  • T226C
  • A228G
  • G252A
  • A276G
  • G294A
  • G297A
  • T312C
  • A324G
  • T330C
  • T336C
  • G372T
  • T384C
  • T397A
  • G404T
  • C405T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001474.2 reference

    Substitutions

    C

  • C:S101T
  • C:G103V
  • C:M104V
  • C:L108M
    • Deletions
    None
    Insertions
    None