GenSpectrum
Organisms
Influenza A
GenSpectrum
Organisms
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
RSV-A
RSV B
Docs
API docs
Influenza A
|
Browse data
GS_00G9Q7W.1
Download
Download FASTA
Download metadata TSV
Display Name: USA/GS_00G9Q7W.1/2025-10-14
E. B. Fox,
J. M. Garrigues &
N. M. Green
Submission details
Submission ID
PX495511.1.seg1/PX495512.1.seg2/PX495513.1.seg3/PX495514.1.seg4/PX495515.1.seg5/PX495516.1.seg6/PX495517.1.seg7/PX495518.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-11-08 04:52:38 UTC
Date released
2025-11-08 04:53:26 UTC
Authors
Author affiliations
Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories
Sample details
Collection country
USA
Collection subdivision level 1
California
Collection date
2025-10-14
Isolate name
A/California/LACPHL-INF02034/2025
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession seg1
PX495511.1
INSDC accession seg2
PX495512.1
INSDC accession seg3
PX495513.1
INSDC accession seg4
PX495514.1
INSDC accession seg5
PX495515.1
INSDC accession seg6
PX495516.1
INSDC accession seg7
PX495517.1
INSDC accession seg8
PX495518.1
NCBI release date
2025-11-07
Alignment states and QC metrics seg1
Length seg1
2280
Alignment states and QC metrics seg2
Length seg2
2274
Alignment states and QC metrics seg3
Length seg3
2151
Alignment states and QC metrics seg4
Length seg4
1701
Alignment states and QC metrics seg5
Length seg5
1497
Alignment states and QC metrics seg6
Length seg6
1410
Alignment states and QC metrics seg7
Length seg7
982
Alignment states and QC metrics seg8
Length seg8
863
INSDC seg4
Subtype seg4
H3
INSDC seg6
Subtype seg6
N2
Clade
HA subtype
H3
NA subtype
N2
Nucleotide mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Load sequences