GenSpectrum
Organisms
Influenza A
GenSpectrum
Organisms
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
RSV-A
RSV B
Docs
API docs
Influenza A
|
Browse data
GS_00G971R.1
Download
Download FASTA
Download metadata TSV
Display Name: Puerto_Rico/GS_00G971R.1/2025-09-26
W. E. Gruner,
V. S. Hogan,
D. M. Muehleman,
A. C. Fries,
J. F. Hanson,
D. L. Kramer,
L. S. Demarcus,
P. M. Wasik,
E. A. Macias,
J. M. Garcia,
C. A. Smetana &
T. R. Hartless
Submission details
Submission ID
PX490470.1.seg1/PX490446.1.seg4/PX490456.1.seg5/PX490450.1.seg7/PX490460.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-11-05 08:33:44 UTC
Date released
2025-11-05 08:34:39 UTC
Authors
Author affiliations
United States Air Force School of Aerospace Medicine Public Health Submission Group, 711th Human Performance Wing
Sample details
Collection country
Puerto Rico
Collection subdivision level 1
San Juan
Collection date
2025-09-26
Isolate name
A/San Juan/USAFSAM-16364/2025
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession seg1
PX490470.1
INSDC accession seg4
PX490446.1
INSDC accession seg5
PX490456.1
INSDC accession seg7
PX490450.1
INSDC accession seg8
PX490460.1
NCBI release date
2025-11-04
Alignment states and QC metrics seg1
Length seg1
2280
Alignment states and QC metrics seg4
Length seg4
1701
Alignment states and QC metrics seg5
Length seg5
1497
Alignment states and QC metrics seg7
Length seg7
982
Alignment states and QC metrics seg8
Length seg8
838
INSDC seg4
Subtype seg4
H1
Clade
HA subtype
H1
Nucleotide mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Load sequences