GS_00G8QJ9.1

Display Name: India/GS_00G8QJ9.1/2025-04-01
H. Sivakumar, F. S. Philomenadin, N. Devanathan & R. Dhodapkar

Submission details

Submission ID
PX460873.1
Submitting group
Date submitted
2025-10-22 06:26:54 UTC
Date released
2025-10-22 06:27:18 UTC

Authors

Author affiliations
JIPMER, Dept of Microbiology

Clade & Lineage

Clade
3III_A

Alignment states and QC metrics

Completeness
48.16%
Length
504
Total ambiguous nucs
0
Total deleted nucs
4652
Total frame shifts
0
Total inserted nucs
0
Total SNPs
18
Total unknown nucs
0

Sample details

Collection country
India
Collection subdivision level 1
Puducherry
Collection date
2025-04-01
Isolate name
FEB-2590

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-10-21
NCBI update date
2025-10-21

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • A131T
  • C203T
  • T235C
  • T250C
  • C256T
  • A265G
  • C289T
  • T295C
  • C334T
  • C358T
  • C383A
  • A416G
  • T436C
  • T496A
  • T556C
  • G565A
  • A616G
  • T619A
    • Deletions
    628-5279
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001475.2 reference

    Substitutions

    C

  • C:I13F
  • C:Q97K
  • C:I108V
    • Deletions
    None
    Insertions
    None