GS_00G8Q44.1

Display Name: India/GS_00G8Q44.1/2025-02-21
H. Sivakumar, F. S. Philomenadin, N. Devanathan & R. Dhodapkar

Submission details

Submission ID
PX460871.1
Submitting group
Date submitted
2025-10-22 06:24:42 UTC
Date released
2025-10-22 06:25:01 UTC

Authors

Author affiliations
JIPMER, Dept of Microbiology

Clade & Lineage

Clade
2II_F.1.1

Alignment states and QC metrics

Completeness
4.70%
Length
504
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
37
Total unknown nucs
0

Sample details

Collection country
India
Collection subdivision level 1
Puducherry
Collection date
2025-02-21
Isolate name
FEB-1626

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-10-21
NCBI update date
2025-10-21

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • A152T
  • G168A
  • A177G
  • G210A
  • T226C
  • A228G
  • G252A
  • A276G
  • G294A
  • G297A
  • T312C
  • A324G
  • T330C
  • T336C
  • G372T
  • T384C
  • T397A
  • C405T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001474.2 reference

    Substitutions

    C

  • C:E19V
  • C:S101T
  • C:M104I
  • C:L108M

    • prM

  • prM:D29N
  • prM:L41R
  • prM:E43A
  • prM:L44M
  • prM:K52N
    • Deletions
    None
    Insertions
    None