GenSpectrum
Influenza A
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
RSV-A
RSV B
Browse
GenSpectrum
Browse
Docs
API docs
GS_00F3XZH.1
Download
Download FASTA
Download metadata TSV
Display Name: Slovakia/GS_00F3XZH.1/2025-03-10
T. Sladecek
Submission details
Submission ID
OZ274033.1.seg1/OZ274032.1.seg2/OZ274028.1.seg3/OZ274026.1.seg4/OZ274030.1.seg5/OZ274027.1.seg6/OZ274029.1.seg7/OZ274031.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-08-12 17:10:06 UTC
Date released
2025-08-13 01:51:20 UTC
Authors
Author affiliations
Science Park of Comenius University of Bratislava, Ilkovicova 8, 841 04 Bratislava
INSDC
Bioproject accession
PRJEB72255
Biosample accession
SAMEA118570067
INSDC accession seg1
OZ274033.1
INSDC accession seg2
OZ274032.1
INSDC accession seg3
OZ274028.1
INSDC accession seg4
OZ274026.1
INSDC accession seg5
OZ274030.1
INSDC accession seg6
OZ274027.1
INSDC accession seg7
OZ274029.1
INSDC accession seg8
OZ274031.1
NCBI release date
2025-06-21
SRA run accession
ERR15131931
Sample details
Collection country
Slovakia
Collection date
2025-03-10
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Alignment states and QC metrics seg1
Length seg1
2316
Alignment states and QC metrics seg2
Length seg2
2316
Alignment states and QC metrics seg3
Length seg3
2208
Alignment states and QC metrics seg4
Length seg4
1752
Alignment states and QC metrics seg5
Length seg5
1540
Alignment states and QC metrics seg6
Length seg6
1433
Alignment states and QC metrics seg7
Length seg7
1000
Alignment states and QC metrics seg8
Length seg8
865
INSDC seg4
Subtype seg4
H1
INSDC seg6
Subtype seg6
N1
Clade
HA subtype
H1
NA subtype
N1
Nucleotide mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_007357.1
,
NC_007358.1
,
NC_007359.1
,
NC_007362.1
,
NC_007360.1
,
NC_007361.1
,
NC_007363.1
&
NC_007364.1
references
Substitutions
Deletions
None
Insertions
None
Load sequences