GS_00ET50U.1

Display Name: India/GS_00ET50U.1/2023-09-28
A. Tripathi & P. Ghosh

Submission details

Submission ID
PV919546.1
Submitting group
Date submitted
2025-07-19 03:17:31 UTC
Date released
2025-07-19 03:17:56 UTC

Authors

Author affiliations
Calcutta School of Tropical Medicine, Biochemistry and Medical Biotechnology

Clade & Lineage

Clade
unassigned

Alignment states and QC metrics

Completeness
3.36%
Length
361
Total ambiguous nucs
0
Total deleted nucs
3
Total frame shifts
0
Total inserted nucs
6
Total SNPs
13
Total unknown nucs
0

Sample details

Collection country
India
Collection date
2023-09-28
Isolate name
D2328

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-07-16
NCBI update date
2025-07-16

Nucleotide mutations

Mutations called relative to the NC_002640.1 reference

Substitutions

  • T10318C
  • A10350C
  • T10352A
  • T10355C
  • T10367A
  • G10450A
  • T10452C
  • A10453G
  • A10563T
  • G10607C
  • G10609C
  • A10616G
  • G10626T
    • Deletions
    10374, 10632, 10633
    Insertions
    ins_10627:GTAGTA

    Amino acid mutations

    Mutations called relative to the NC_002640.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None