GS_00ER41X.1

India/GS_00ER41X.1/2024-11-21
P. Singh, S. Negi, K. Sharma, R. Khare & A. Bhargava

Department of Microbiology, All India Institute of Medical Sciences, State Virus Research and Diagnostic Laboratory (VRDL)

Submission details

Submission ID
PV554932.1
Submitting group
Date submitted
2025-07-07 07:58:14 UTC
Date released
2025-07-07 13:06:24 UTC

Clade & Lineage

Clade
2V

Sample details

Collection country
India
Collection date
2024-11-21
Isolate name
AIIMSR-DEN-92/2024

Host

Host

INSDC

INSDC accession
NCBI release date
2025-04-29
NCBI update date
2025-04-29

Alignment and QC

Length
10610 (98.9%)
Total SNPs
44

Nucleotide mutations

Mutations called relative to the NC_001474.2 reference

Substitutions

  • G44A
  • C54T
  • A122G
  • C126T
  • G168A
  • A177G
  • G210A
  • T226C
  • A228G
  • G252A
  • T456C
  • C459T
  • G2085A
  • A2105G
  • T2124C
  • C2130T
  • G2157A
  • G2160A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001474.2 reference

Substitutions

C

  • C:K9R

E

  • E:N390S

NS2A

  • NS2A:V5I
Deletions
N/A
Insertions
N/A