GS_00E32ZD.1

Display Name: Thailand/GS_00E32ZD.1/2024-07-22
P. Sittikul, I. Wirasit, K. Taoma, J. Rattanamahaphoom, P. Sriburin, W. Nuprasert, K. Limkittikul, C. Rotejanaprasert & S. Chatchen

Submission details

Submission ID
PV663093.1
Submitting group
Date submitted
2025-07-07 07:51:38 UTC
Date released
2025-07-07 14:24:05 UTC

Authors

Author affiliations
Mahidol university, Department of Tropical Pediatrics, Faculty of Tropical Medicine

Clade & Lineage

Clade
1I_K.1.1

Alignment states and QC metrics

Completeness
13.83%
Length
1485
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
121
Total unknown nucs
0

Sample details

Collection country
Thailand
Collection subdivision level 1
Bangkok
Collection date
2024-07-22
Isolate name
ID0297

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2025-05-30
NCBI update date
2025-05-30

Nucleotide mutations

Mutations called relative to the NC_001477.1 reference

Substitutions

  • G940A
  • C955T
  • C958T
  • T988A
  • G991T
  • G997A
  • A1006G
  • C1007T
  • G1012A
  • C1045T
  • C1055T
  • G1081A
  • C1084T
  • A1088G
  • C1114T
  • T1123C
  • C1144T
  • T1147C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001477.1 reference

    Substitutions

    E

  • E:N52D
  • E:T88A
  • E:F96L
  • E:T155S
  • E:S171T
  • E:K203E
  • E:I293T
  • E:Q323L
  • E:V324I
  • E:S339T
  • E:V380I
  • E:I436V
  • E:I461V
  • E:M484L
    • Deletions
    None
    Insertions
    None