GenSpectrum
Dengue 4
Influenza B/Victoria
Dengue 1
Dengue 2
Dengue 3
Dengue 4
Influenza A/H1N1pdm
Influenza A/H3N2
Influenza A/H5N1
Influenza A
Influenza B
RSV-A
RSV B
Browse
GenSpectrum
Browse
Docs
API docs
GS_00DLEE6.1
Download
Download FASTA
Download metadata TSV
Display Name: Laos/GS_00DLEE6.1/2024-07-26
l. Yuan
Submission details
Submission ID
PV544768.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-07-07 07:49:50 UTC
Date released
2025-07-07 08:19:52 UTC
Authors
Author affiliations
kunming university of science and technology, faculty of life science and technology
Clade & Lineage
Clade
4I_A.3
Alignment states and QC metrics
Completeness
13.94%
Length
1485
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
129
Total unknown nucs
0
Sample details
Collection country
Laos
Collection date
2024-07-26
Isolate name
ML-01
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PV544768.1
NCBI release date
2025-04-24
NCBI update date
2025-04-24
Nucleotide mutations
Mutations called relative to the
NC_002640.1
reference
Substitutions
A
956
G
A
959
G
C
968
T
G
974
A
C
1004
T
C
1028
T
C
1031
T
C
1075
T
T
1076
C
G
1103
A
C
1127
T
A
1130
C
T
1145
C
A
1151
G
T
1181
C
G
1184
C
G
1196
A
C
1199
T
Show more
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_002640.1
reference
Substitutions
E
E:
T
46
I
E:
V
96
M
E:
V
151
A
E:
M
163
T
E:
K
203
T
E:
S
227
L
E:
Y
233
H
E:
A
329
T
E:
I
351
V
E:
L
357
F
E:
N
384
E
E:
F
429
L
E:
I
455
V
E:
F
461
L
E:
T
478
S
E:
Q
494
H
Deletions
None
Insertions
None
Load sequences