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GS_00DD7P9.1
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Display Name: USA/GS_00DD7P9.1/2025-03-23
Kunerth,
H. D.; Plumb,
M.; Namugenyi,
S.; Evans,
D.; Bohnkers-Voels,
L.; Strain,
A.
Submission details
Submission ID
PV546183.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-04-28 03:13:57 UTC
Date released
2025-04-28 03:14:10 UTC
Authors
Author affiliations
Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab
INSDC
Bioproject accession
PRJNA1048457
Biosample accession
SAMN48059294
INSDC accession
PV546183.1
NCBI release date
2025-04-27
NCBI update date
2025-04-27
SRA run accession
SRR33217276
Alignment states and QC metrics
Completeness
98.67%
Length
15141
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
4
Total SNPs
143
Total unknown nucs
119
Sample details
Collection country
USA
Collection subdivision level 1
Minnesota
Collection date
2025-03-23
Isolate name
MN-MDH-RSVB-02847
Host
Host name scientific
Homo sapiens
Host taxon id
9606
Clade & Lineage
Lineage
B.D.E.1
Nucleotide mutations
Substitutions
G
513
T
G
579
A
A
695
G
G
830
A
C
998
A
G
1385
A
G
1531
T
G
1732
A
T
1846
C
A
1864
G
G
1963
A
G
2008
A
C
2074
T
C
2198
T
T
2418
C
T
2529
C
C
2691
T
C
2694
T
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Deletions
973
Insertions
ins_15092:ATAT
Amino acid mutations
Substitutions
F
F:
S
190
N
F:
S
211
N
F:
S
389
P
G
G:
A
74
V
G:
S
100
G
G:
T
131
A
G:
I
137
T
G:
N
202
T
G:
P
214
S
G:
L
217
P
G:
P
221
L
G:
I
252
T
G:
K
256
N
G:
E
259
G
G:
I
268
T
G:
S
275
P
G:
Y
285
H
L
L:
Q
52
K
L:
N
176
S
L:
V
488
A
L:
K
570
R
L:
T
1737
A
L:
R
1759
K
L:
T
1987
I
M
M:
T
136
A
N
N:
V
97
I
NS2
NS2:
K
38
E
NS2:
E
83
K
Deletions
None
Insertions
None
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