GS_00BC9DY.1

Display Name: USA/GS_00BC9DY.1/2025-02-10
Rothstein, A. P.; Collins, S.; Muir, G.; Qiu, X.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PV246587.1.seg1/PV246588.1.seg2/PV246586.1.seg3/PV246582.1.seg4/PV246584.1.seg6/PV246583.1.seg7/PV246585.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-07 21:07:29 UTC
Date released
2025-03-07 21:07:43 UTC

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
New Jersey
Collection date
2025-02-10
Isolate name
GKISBBBE55040

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PV246587.1
INSDC accession seg2
PV246588.1
INSDC accession seg3
PV246586.1
INSDC accession seg4
PV246582.1
INSDC accession seg6
PV246584.1
INSDC accession seg7
PV246583.1
INSDC accession seg8
PV246585.1
NCBI release date
2025-03-07

Alignment states and QC metrics seg1

Length seg1
2355

Alignment states and QC metrics seg2

Length seg2
2382

Alignment states and QC metrics seg3

Length seg3
2292

Alignment states and QC metrics seg4

Length seg4
1849

Alignment states and QC metrics seg6

Length seg6
1528

Alignment states and QC metrics seg7

Length seg7
1159

Alignment states and QC metrics seg8

Length seg8
1066

INSDC seg4

Lineage seg4
vic

Clade

Lineage ha
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None