GS_00BC996.1

Display Name: USA/GS_00BC996.1/2025-02-13
Rothstein, A. P.; Collins, S.; Muir, G.; Qiu, X.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PV246570.1.seg1/PV246568.1.seg4/PV246569.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-07 21:07:29 UTC
Date released
2025-03-07 21:07:43 UTC

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
Washington
Collection date
2025-02-13
Isolate name
GKISBBBE36812

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PV246570.1
INSDC accession seg4
PV246568.1
INSDC accession seg8
PV246569.1
NCBI release date
2025-03-07

Alignment states and QC metrics seg1

Length seg1
2341

Alignment states and QC metrics seg4

Length seg4
1847

Alignment states and QC metrics seg8

Length seg8
1066

INSDC seg4

Lineage seg4
vic

Clade

Lineage ha
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None