GS_00BC8LJ.1

Display Name: USA/GS_00BC8LJ.1/2025-01-20
Rothstein, A. P.; Collins, S.; Muir, G.; Qiu, X.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PV246407.1.seg1/PV246406.1.seg3/PV246402.1.seg4/PV246405.1.seg5/PV246404.1.seg6/PV246403.1.seg7
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-07 21:07:29 UTC
Date released
2025-03-07 21:07:43 UTC

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
Washington
Collection date
2025-01-20
Isolate name
GKISBBBC76812

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PV246407.1
INSDC accession seg3
PV246406.1
INSDC accession seg4
PV246402.1
INSDC accession seg5
PV246405.1
INSDC accession seg6
PV246404.1
INSDC accession seg7
PV246403.1
NCBI release date
2025-03-07

Alignment states and QC metrics seg1

Length seg1
2356

Alignment states and QC metrics seg3

Length seg3
2275

Alignment states and QC metrics seg4

Length seg4
1847

Alignment states and QC metrics seg5

Length seg5
1817

Alignment states and QC metrics seg6

Length seg6
1528

Alignment states and QC metrics seg7

Length seg7
1155

INSDC seg4

Lineage seg4
vic

Clade

Lineage ha
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None