GS_00AVEBX.1

Display Name: USA/GS_00AVEBX.1/2024-12-13
Dohrn, C.

Submission details

Submission ID
PQ888840.1.seg4/PQ888841.1.seg6
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-01-22 16:54:04 UTC
Date released
2025-01-22 16:55:11 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-01-22 16:54insdc_ingest_userOPEN

Authors

Author affiliations
Iowa State University Veterinary Diagnostic Lab, Bioinformatics

Sample details

Collection country
USA
Collection subdivision level 1
Iowa
Collection date
2024-12-13
Isolate name
A02858229

Host

Host name scientific
Sus scrofa
Host taxon id
9823

INSDC

INSDC accession seg4
PQ888840.1
INSDC accession seg6
PQ888841.1
NCBI release date
2025-01-16

Alignment states and QC metrics seg4

Length seg4
1698

Alignment states and QC metrics seg6

Length seg6
1410

INSDC seg4

Subtype seg4
H1

INSDC seg6

Subtype seg6
N2

Clade

HA subtype
H1
NA subtype
N2

Nucleotide mutations

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Substitutions
Deletions
None
Insertions
None