GS_00AVC3F.1

Display Name: USA/GS_00AVC3F.1/2024-12-11
Gruner, W. E.; Muehleman, D. M.; Fries, A. C.; Hanson, J. F.; Kramer, D. L.; Demarcus, L. S.; Wasik, P. M.; Robbins, A. S.; Macias, E. A.; Garcia, J. M.; Renkas, M. C.; Hartless, T. R.; Hardy, J.

Submission details

Submission ID
PQ856980.1.seg1/PQ856967.1.seg2/PQ856956.1.seg3/PQ856885.1.seg4/PQ856930.1.seg5/PQ856915.1.seg6/PQ856900.1.seg7/PQ856943.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-01-22 16:54:04 UTC
Date released
2025-01-22 16:55:11 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-01-22 16:54insdc_ingest_userOPEN

Authors

Author affiliations
United States Air Force School of Aerospace Medicine Public Health Submission Group, 711th Human Performance Wing

Sample details

Collection country
USA
Collection subdivision level 1
Nevada
Collection date
2024-12-11
Isolate name
USAFSAM-15040

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PQ856980.1
INSDC accession seg2
PQ856967.1
INSDC accession seg3
PQ856956.1
INSDC accession seg4
PQ856885.1
INSDC accession seg5
PQ856930.1
INSDC accession seg6
PQ856915.1
INSDC accession seg7
PQ856900.1
INSDC accession seg8
PQ856943.1
NCBI release date
2025-01-09

Alignment states and QC metrics seg1

Length seg1
2280

Alignment states and QC metrics seg2

Length seg2
2274

Alignment states and QC metrics seg3

Length seg3
2151

Alignment states and QC metrics seg4

Length seg4
1701

Alignment states and QC metrics seg5

Length seg5
1497

Alignment states and QC metrics seg6

Length seg6
1410

Alignment states and QC metrics seg7

Length seg7
982

Alignment states and QC metrics seg8

Length seg8
838

INSDC seg4

Subtype seg4
H3

INSDC seg6

Subtype seg6
N2

Clade

HA subtype
H3
NA subtype
N2

Nucleotide mutations

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Substitutions
Deletions
None
Insertions
None