GS_00AV96C.1

Display Name: USA/GS_00AV96C.1/2024-12-29
Rothstein, A. P.; Collins, S.; Muir, G.; Qiu, X.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PQ850373.1.seg1/PQ850372.1.seg2/PQ850371.1.seg3/PQ850369.1.seg5/PQ850368.1.seg6/PQ850367.1.seg7/PQ850370.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-01-22 16:54:04 UTC
Date released
2025-01-22 16:55:11 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-01-22 16:54insdc_ingest_userOPEN

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
California
Collection date
2024-12-29
Isolate name
GKISBBBF23553

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PQ850373.1
INSDC accession seg2
PQ850372.1
INSDC accession seg3
PQ850371.1
INSDC accession seg5
PQ850369.1
INSDC accession seg6
PQ850368.1
INSDC accession seg7
PQ850367.1
INSDC accession seg8
PQ850370.1
NCBI release date
2025-01-08

Alignment states and QC metrics seg1

Length seg1
2318

Alignment states and QC metrics seg2

Length seg2
2299

Alignment states and QC metrics seg3

Length seg3
2208

Alignment states and QC metrics seg5

Length seg5
1540

Alignment states and QC metrics seg6

Length seg6
1433

Alignment states and QC metrics seg7

Length seg7
1004

Alignment states and QC metrics seg8

Length seg8
867

INSDC seg6

Subtype seg6
N1

Clade

NA subtype
N1

Nucleotide mutations

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Substitutions
Deletions
None
Insertions
None