GS_00AV7V1.1

Display Name: USA/GS_00AV7V1.1/2024-12-17
Rothstein, A. P.; Collins, S.; Muir, G.; Qiu, X.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PQ850058.1.seg1/PQ850054.1.seg4/PQ850056.1.seg5/PQ850055.1.seg7/PQ850057.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-01-22 16:54:04 UTC
Date released
2025-01-22 16:55:11 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-01-22 16:54insdc_ingest_userOPEN

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
Washington
Collection date
2024-12-17
Isolate name
GKISBBBE05074

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg1
PQ850058.1
INSDC accession seg4
PQ850054.1
INSDC accession seg5
PQ850056.1
INSDC accession seg7
PQ850055.1
INSDC accession seg8
PQ850057.1
NCBI release date
2025-01-08

Alignment states and QC metrics seg1

Length seg1
2304

Alignment states and QC metrics seg4

Length seg4
1732

Alignment states and QC metrics seg5

Length seg5
1526

Alignment states and QC metrics seg7

Length seg7
998

Alignment states and QC metrics seg8

Length seg8
861

INSDC seg4

Subtype seg4
H3

Clade

HA subtype
H3

Nucleotide mutations

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Substitutions
Deletions
None
Insertions
None