GS_00AQC5M.1

Display Name: Australia/GS_00AQC5M.1/2025-02-06
Batovska, J.; Mee, P.; Mileto, P.; Stevens, V.; Neave, M. J.

Submission details

Submission ID
PV133390.1.seg1/PV133389.1.seg2/PV133388.1.seg3/PV133383.1.seg4/PV133386.1.seg5/PV133385.1.seg6/PV133384.1.seg7/PV133387.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 14:24:59 UTC
Date released
2025-03-05 16:29:11 UTC

Authors

Author affiliations
CSIRO, Australian Centre for Disease Preparedness

Sample details

Collection country
Australia
Collection subdivision level 1
Strathbogie LGA, Victoria
Collection date
2025-02-06
Isolate name
25-00440-0002

Host

Host name scientific
Gallus gallus
Host taxon id
9031

INSDC

INSDC accession seg1
PV133390.1
INSDC accession seg2
PV133389.1
INSDC accession seg3
PV133388.1
INSDC accession seg4
PV133383.1
INSDC accession seg5
PV133386.1
INSDC accession seg6
PV133385.1
INSDC accession seg7
PV133384.1
INSDC accession seg8
PV133387.1
NCBI release date
2025-02-19

Alignment states and QC metrics seg1

Length seg1
2280

Alignment states and QC metrics seg2

Length seg2
2274

Alignment states and QC metrics seg3

Length seg3
2151

Alignment states and QC metrics seg4

Length seg4
1704

Alignment states and QC metrics seg5

Length seg5
1497

Alignment states and QC metrics seg6

Length seg6
1413

Alignment states and QC metrics seg7

Length seg7
982

Alignment states and QC metrics seg8

Length seg8
838

INSDC seg4

Subtype seg4
H7

INSDC seg6

Subtype seg6
N8

Clade

HA subtype
H7
NA subtype
N8

Nucleotide mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the NC_007357.1, NC_007358.1, NC_007359.1, NC_007362.1, NC_007360.1, NC_007361.1, NC_007363.1 & NC_007364.1 references

Substitutions
Deletions
None
Insertions
None