GS_001YXG7.1

Display Name: USA/GS_001YXG7.1/2024-12-16
Steel, J.; Kirby, M.; Garten, R.; Davis, T.; Dugan, V.

Submission details

Submission ID
PV150888.1.seg1/PV150887.1.seg2/PV150889.1.seg3/PV150890.1.seg4/PV150891.1.seg5/PV150892.1.seg6/PV150893.1.seg7/PV150894.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 13:05:08 UTC
Date released
2025-03-05 13:12:22 UTC

Authors

Author affiliations
Centers for Disease Control and Prevention, Influenza Division

INSDC

Bioproject accession
PRJNA998882
INSDC accession seg1
PV150888.1
INSDC accession seg2
PV150887.1
INSDC accession seg3
PV150889.1
INSDC accession seg4
PV150890.1
INSDC accession seg5
PV150891.1
INSDC accession seg6
PV150892.1
INSDC accession seg7
PV150893.1
INSDC accession seg8
PV150894.1
NCBI release date
2025-02-20

Sample details

Collection country
USA
Collection subdivision level 1
Iowa
Collection date
2024-12-16
Isolate name
EPI_ISL_19668625

Host

Host name scientific
Homo sapiens
Host taxon id
9606

Alignment states and QC metrics seg1

Length seg1
2340

Alignment states and QC metrics seg2

Length seg2
2367

Alignment states and QC metrics seg3

Length seg3
2275

Alignment states and QC metrics seg4

Length seg4
1847

Alignment states and QC metrics seg5

Length seg5
1815

Alignment states and QC metrics seg6

Length seg6
1528

Alignment states and QC metrics seg7

Length seg7
1154

Alignment states and QC metrics seg8

Length seg8
1066

INSDC seg4

Lineage seg4
vic

Clade

Lineage ha
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None