GS_001XSAS.1

Display Name: USA/GS_001XSAS.1/2024-12-18
Rothstein, A. P.; Collins, S.; Muir, G.; Qiu, X.; Simas, A.; Lu, B.; Cosca, B.; Girinathan, B.; Leeson, P.; Philipson, C. W.; Plocik, A. M.; Simen, B.

Submission details

Submission ID
PQ849886.1.seg4/PQ849887.1.seg6/PQ849888.1.seg8
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 13:05:08 UTC
Date released
2025-03-05 13:12:22 UTC

Authors

Author affiliations
Ginkgo Bioworks, Ginkgo Biosecurity

Sample details

Collection country
USA
Collection subdivision level 1
Virginia
Collection date
2024-12-18
Isolate name
GKISBBBE67382

Host

Host name scientific
Homo sapiens
Host taxon id
9606

INSDC

INSDC accession seg4
PQ849886.1
INSDC accession seg6
PQ849887.1
INSDC accession seg8
PQ849888.1
NCBI release date
2025-01-08

Alignment states and QC metrics seg4

Length seg4
1818

Alignment states and QC metrics seg6

Length seg6
1521

Alignment states and QC metrics seg8

Length seg8
1041

INSDC seg4

Lineage seg4
vic

Clade

Lineage ha
vic

Nucleotide mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None

Amino acid mutations

Mutations called relative to the CY115157.1, CY115158.1, CY115156.1, KX058884.1, CY115154.1, CY073894.1, CY115152.1 & CY115155.1 references

Substitutions
Deletions
None
Insertions
None