Display Name: GS_001E08P.1/2024-07-16
Acuna, D.; Irazoqui, M.; Palau, M. J.; Vera, A.; Vescina, C. M.; Trevino, N. P.; Eguiguren, M. P.; Fernandez Gago, G.; Alancay, A.; Nadalich, V.; Angeletti, A.; Cordero, A.; Viegas, M.

Submission details

Submission ID
PQ600475.1
Date submitted
2024-11-26 17:57:01 UTC
Date released
2024-11-26 17:57:27 UTC

Data use terms

Data use terms
OPEN

Authors

Author affiliations
CONICET (National Council for Scientific and Technical Research), Exacts Sciences School, National University of la Plata

Alignment states and QC metrics

Completeness
99.95%
Length
15217
Total ambiguous nucs
0
Total deleted nucs
1
Total frame shifts
0
Total inserted nucs
4
Total SNPs
113
Total unknown nucs
0

Sample details

Collection country
Argentina
Collection subdivision level 1
Buenos Aires, La Plata
Collection date
2024-07-16
Isolate name
HRSV/B/Argentina/PAIS-HSML/42/2024-07-16

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession
NCBI release date
2024-11-25
NCBI update date
2024-11-25

Clade & Lineage

Lineage
B.D.E.1

Nucleotide mutations

Substitutions

  • G458C
  • G513T
  • G579A
  • T670C
  • C772A
  • G1385A
  • G1732A
  • G1768A
  • A1864G
  • C1927T
  • C2074T
  • C2198T
  • C2554T
  • C2691T
  • A2925T
  • G3036C
  • A3060G
  • C3067T
  • Deletions
    973
    Insertions
    ins_15092:ATAT

    Amino acid mutations

    Substitutions

    F

  • F:F12I
  • F:S389P
  • G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:I268T
  • G:S275P
  • G:Y285H
  • L

  • L:S169P
  • L:C195Y
  • L:K570R
  • L:S1239N
  • L:R1759K
  • L:T1987I
  • N

  • N:V97I
  • Deletions
    None
    Insertions
    None