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GS_000XASA.1
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Display Name: Australia/GS_000XASA.1/2019-06-02
A. C. Langedijk,
R. J. Lebbink,
L. J. Bont &
A. Evers
Submission details
Submission ID
PP376680.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:55 UTC
Date released
2025-03-05 13:15:59 UTC
Authors
Author affiliations
UMC Utrecht, Paediatric Infectious Diseases
Alignment states and QC metrics
Completeness
99.99%
Length
15225
Total ambiguous nucs
1
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
178
Total unknown nucs
0
Sample details
Collection country
Australia
Collection date
2019-06-02
Isolate name
610102018
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP376680.1
NCBI release date
2024-04-09
NCBI update date
2024-04-09
Clade & Lineage
Lineage
A.D
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
A
47
G
T
66
A
A
67
G
C
90
T
C
123
T
C
183
T
T
195
C
C
228
A
A
509
C
G
555
A
G
766
A
A
974
T
C
1012
T
A
1039
G
G
1050
A
C
1203
T
T
1242
C
T
1359
C
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Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
F
F:
E
2
K
G
G:
P
71
L
G:
H
90
Y
G:
L
101
F
G:
E
123
K
G:
I
134
K
G:
G
224
E
G:
V
225
A
G:
G
232
R
G:
S
243
I
G:
K
262
E
G:
E
263
A
G:
I
265
L
G:
P
274
L
G:
D
284
G
G:
P
298
L
G:
T
320
A
L
L:
P
171
L
L:
R
256
K
L:
L
1438
Q
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
T
1773
M
M
M:
M
254
I
N
N:
V
97
I
N:
V
352
A
P
P:
L
55
P
Deletions
None
Insertions
None
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