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GS_000XAKQ.1
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Display Name: Canada/GS_000XAKQ.1/2020-01-02
A. C. Langedijk,
R. J. Lebbink,
L. J. Bont &
A. Evers
Submission details
Submission ID
PP376673.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-03-05 12:56:55 UTC
Date released
2025-03-05 13:15:59 UTC
Authors
Author affiliations
UMC Utrecht, Paediatric Infectious Diseases
Alignment states and QC metrics
Completeness
100.00%
Length
15223
Total ambiguous nucs
0
Total deleted nucs
2
Total frame shifts
0
Total inserted nucs
0
Total SNPs
174
Total unknown nucs
0
Sample details
Collection country
Canada
Collection date
2020-01-02
Isolate name
010203022
Host
Host name scientific
Homo sapiens
Host taxon id
9606
INSDC
INSDC accession
PP376673.1
NCBI release date
2024-04-09
NCBI update date
2024-04-09
Clade & Lineage
Lineage
A.D
Nucleotide mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
C
58
T
T
66
A
A
67
G
C
90
T
C
183
T
A
518
G
G
670
A
G
766
A
T
826
C
G
901
A
T
945
C
C
1012
T
A
1039
G
G
1050
A
C
1106
T
T
1359
C
A
1476
T
G
1581
A
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Deletions
4174, 4592
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_006432.1
reference
Substitutions
G
G:
P
71
L
G:
H
90
Y
G:
P
95
L
G:
L
101
F
G:
I
134
K
G:
T
200
P
G:
P
215
L
G:
G
224
E
G:
V
225
A
G:
S
243
I
G:
N
255
D
G:
K
262
E
G:
I
265
L
G:
P
274
L
G:
S
275
N
G:
V
279
I
G:
D
284
G
G:
E
295
V
G:
P
298
L
L
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
I
757
T
L:
L
1438
Q
L:
P
1720
T
L:
N
1723
S
L:
G
1731
D
L:
V
2113
C
N
N:
E
122
D
N:
V
352
A
NS2
NS2:
I
116
T
P
P:
L
55
P
Deletions
None
Insertions
None
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